Alternatives and similar repositories for SoftAlign

Users that are interested in SoftAlign are comparing it to the libraries listed below

• psipred / Merizo
  Fast and accurate protein domain segmentation using Invariant Point Attention
  ☆44Updated 7 months ago
• beckham-lab / EpHod
  Machine learning prediction of enzyme optimum pH
  ☆50Updated 8 months ago
• SNU-CSSB / RF2-Lite
  ☆32Updated last year
• minmarg / gtalign_alpha
  GTalign, high-performance protein structure alignment, superposition and search
  ☆52Updated 5 months ago
• JudeWells / chainsaw
  ☆47Updated last year
• Kuhlman-Lab / alphafold3
  Kuhlman Lab Installation of AlphaFold3
  ☆37Updated 3 months ago
• amyguo1997 / dynamic_protein_design
  Code for deep learning guided design of dynamic proteins
  ☆31Updated last year
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆55Updated 5 months ago
• jafetgado / EpHod
  Machine learning prediction of enzyme optimum pH
  ☆23Updated 8 months ago
• DeepRank / DeepRank-GNN-esm
  Graph Network for protein-protein interface including language model features
  ☆34Updated last year
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆51Updated 3 months ago
• LongxingCao / pymol_scripts
  bakerlab pymol scripts
  ☆25Updated 5 years ago
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆61Updated 3 months ago
• RP3Net / RP3Net
  ☆14Updated 7 months ago
• SLx64 / af3cli
  A command-line interface and Python library for generating AlphaFold3 input files.
  ☆38Updated 2 weeks ago
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆90Updated last year
• KULL-Centre / _2024_cagiada_stability
  ☆72Updated 10 months ago
• steineggerlab / folddisco
  Fast indexing and search of discontinuous motifs in protein structures
  ☆111Updated last week
• PKUliujl / GeoSeqBuilder
  ☆32Updated 11 months ago
• CongLabCode / DPAM
  A domain parser for Alphafold models
  ☆46Updated 2 years ago
• dina-lab3D / CombFold
  ☆89Updated last year
• t03i / FlatProt
  A tool for 2D protein visualization aimed at improving the comparability of protein structures through standardized 2D visualizations.
  ☆21Updated 5 months ago
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆77Updated 2 months ago
• AbSciBio / igdesign
  ☆47Updated last year
• Fleishman-Lab / denovoKemp
  code and source data for de novo design of Kemp elimination paper
  ☆24Updated 4 months ago
• Furman-Lab / PatchMAN
  ☆27Updated last month
• VarunUllanat / mint
  Learning the language of protein-protein interactions
  ☆120Updated last week
• bigict / ProDESIGN-LE
  An accurate and efficient protein sequence design approach
  ☆26Updated 10 months ago
• ProteinDesignLab / protpardelle-1c
  Updated Protpardelle models with more robust motif scaffolding and multichain support
  ☆61Updated last month
• lcbc-epfl / metal-site-prediction
  ☆43Updated 2 years ago