pinder-org / pinderLinks
PINDER: The Protein INteraction Dataset and Evaluation Resource
☆127Updated 8 months ago
Alternatives and similar repositories for pinder
Users that are interested in pinder are comparing it to the libraries listed below
Sorting:
- ☆91Updated 9 months ago
- Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http:…☆127Updated 3 months ago
- Dataset and package for working with protein-protein interactions in 3D☆94Updated 2 months ago
- Protein Ligand INteraction Dataset and Evaluation Resource☆233Updated last month
- Sidechain conditioning and modeling for full-atom protein sequence design☆110Updated 3 weeks ago
- ☆170Updated last week
- Protein-ligand structure prediction☆219Updated 11 months ago
- MaSIF-neosurf: surface-based protein design for ternary complexes.☆131Updated last week
- Comprehensive benchmarking of protein-ligand structure prediction methods. (ICML 2024 AI4Science)☆158Updated 3 months ago
- Implementation of DiffDock-PP: Rigid Protein-Protein Docking with Diffusion Models in PyTorch (ICLR 2023 - MLDD Workshop)☆210Updated last year
- ☆108Updated 2 years ago
- ☆100Updated last month
- A compilation of deep learning methods for protein design☆97Updated 2 years ago
- Diffusion-based all-atom protein generative model.☆202Updated 4 months ago
- Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.☆98Updated 11 months ago
- A geometric flow matching model for generative protein-ligand docking and affinity prediction. (ISMB 2025)☆95Updated 3 months ago
- Official repository of EnzymeFlow☆91Updated 7 months ago
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆78Updated last year
- Codebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)☆78Updated last year
- Multi-domain Distribution Learning for De Novo Drug Design☆97Updated 3 months ago
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆179Updated 5 months ago
- Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)☆45Updated 5 months ago
- Diffusion model based protein-ligand flexible docking method☆106Updated 8 months ago
- Masif seed paper repository☆154Updated 2 years ago
- Predict multiple protein conformations using sequence clustering and AlphaFold2.☆158Updated 4 months ago
- [ICLR2025] Official Implementation of IgGM: A Generative Model for Functional Antibody and Nanobody Design☆73Updated 2 months ago
- ☆78Updated last year
- PLACER is graph neural network for local prediction of protein-ligand conformational ensembles.☆140Updated 4 months ago
- ☆65Updated last year
- ☆208Updated 10 months ago