PINDER: The Protein INteraction Dataset and Evaluation Resource
☆155Nov 15, 2024Updated last year
Alternatives and similar repositories for pinder
Users that are interested in pinder are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Protein Ligand INteraction Dataset and Evaluation Resource☆288May 13, 2026Updated last week
- It's a package for evaluation of predicted poses, right?☆77Mar 27, 2026Updated last month
- Structure-conditioned masked language modeling for protein sequence design☆74Jan 31, 2024Updated 2 years ago
- A high performance drop-in replacement for Biotite's PDBFile.☆42May 27, 2025Updated 11 months ago
- FoldFlow: SE(3)-Stochastic Flow Matching for Protein Backbone Generation☆286Dec 10, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆192Jun 24, 2024Updated last year
- Resources for Generalisable Protein Complex Prediction☆19Oct 16, 2024Updated last year
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆252Mar 26, 2026Updated last month
- A standardized protein design benchmark for motif-scaffolding problems☆79Jan 27, 2026Updated 3 months ago
- Fast protein backbone generation with SE(3) flow matching.☆328Jul 19, 2024Updated last year
- Implementation for SE(3) diffusion model with application to protein backbone generation☆421Jul 3, 2023Updated 2 years ago
- ☆130Feb 20, 2026Updated 3 months ago
- AlphaFold Meets Flow Matching for Generating Protein Ensembles☆527Mar 22, 2026Updated 2 months ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆46May 22, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Chai-1, SOTA model for biomolecular structure prediction☆1,938Apr 11, 2026Updated last month
- Fast protein structure searching or your money back☆119Apr 13, 2026Updated last month
- A generative model for programmable protein design☆818Apr 11, 2024Updated 2 years ago
- TMol☆75May 15, 2026Updated last week
- ☆118Dec 7, 2022Updated 3 years ago
- ☆224Mar 2, 2024Updated 2 years ago
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆130Nov 19, 2025Updated 6 months ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆138Nov 11, 2025Updated 6 months ago
- Dataset and package for working with protein-protein interactions in 3D☆108Apr 28, 2025Updated last year
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- De Novo Protein Design by Equivariantly Diffusing Oriented Residue Clouds☆188Apr 21, 2024Updated 2 years ago
- Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http:…☆153Apr 16, 2025Updated last year
- FAPLM: A Drop-in Efficient Pytorch Implementation of Protein Language Models☆168Mar 28, 2026Updated last month
- Template-based protein design with Raygun☆81Apr 12, 2026Updated last month
- Official repository for the ProteinGym benchmarks☆430Mar 25, 2026Updated 2 months ago
- ☆809Updated this week
- ☆250Feb 12, 2026Updated 3 months ago
- ☆212Apr 21, 2025Updated last year
- Toward High-Accuracy Open-Source Biomolecular Structure Prediction.☆1,906May 6, 2026Updated 2 weeks ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- User friendly and accurate binder design pipeline☆1,096May 11, 2026Updated 2 weeks ago
- Code for designing binders to flexible peptides with AlphaFold2 Hallucination☆30Dec 21, 2023Updated 2 years ago
- Lbster: Language models for Biological Sequence Transformation and Evolutionary Representation☆162May 5, 2026Updated 2 weeks ago
- ☆18Oct 30, 2023Updated 2 years ago
- Aligning protein generative models with experimental fitness☆121Mar 12, 2026Updated 2 months ago
- Protein structure datasets for machine learning.☆114Apr 22, 2025Updated last year
- ☆87Feb 11, 2026Updated 3 months ago