gtonkinhill / TCGA_analysisLinks
☆27Updated last year
Alternatives and similar repositories for TCGA_analysis
Users that are interested in TCGA_analysis are comparing it to the libraries listed below
Sorting:
- A shiny package for microbiome functional enrichment analysis☆37Updated last month
- MTD: a unique pipeline for host and meta-transcriptome joint and integrative analyses of RNA-seq data☆16Updated last year
- ☆21Updated 9 months ago
- Re-analysis of data provided by Gihawi et al. 2023 bioRxiv☆26Updated last year
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- ☆32Updated last year
- ☆13Updated 2 years ago
- ☆16Updated this week
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆26Updated last year
- interactive plots for differential expression analysis☆32Updated 2 months ago
- R package for microbiome analysis. Provides helper functions for common workflows ranging from preprocessing to visualization.☆23Updated last year
- Merge fastq files split over lanes☆20Updated 7 years ago
- mulea - an R package for enrichment analysis using various ontologies and empirical false discovery rate☆29Updated 5 months ago
- 📊 An R package of RNA-seq workflow☆16Updated 3 years ago
- Isoform-level functional RNA-Seq analysis 🧬☆25Updated last week
- Accurate estimation and robust modelling of translation dynamics at codon resolution☆20Updated 7 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated 2 weeks ago
- Time-Course Multi-Omics data integration☆25Updated last year
- Model-based Genomically Informed High-dimensional Predictor of Microbial Community Metabolic Profiles☆35Updated last year
- Tutorial to reproduce the analysis of Peixoto et al. (2015)☆9Updated 9 years ago
- A command line tool to compute mapping statistics from a BAM file☆24Updated 3 years ago
- Flexible Bayesian inference of mutational signatures☆34Updated 2 years ago
- Teaching modules for Human Genome Variation Lab.☆20Updated 10 months ago
- ☆26Updated 2 months ago
- An extension class of SummarizedExperiment to allow hierarchical structure on the row or column dimension☆13Updated 2 months ago
- ☆29Updated 10 months ago
- ☆29Updated 7 months ago
- Microbe-Metabolite INteractions-based metabolic profiles Predictor☆15Updated 2 years ago
- A set of R functions that help faciliate a lot of tedious processing☆18Updated 6 years ago
- Do microbiome analysis with dada2 and phyloseq object☆13Updated 7 months ago