AC-PCA: simultaneously performs dimension reduction and adjustment for confounding variation
☆14Sep 26, 2020Updated 5 years ago
Alternatives and similar repositories for AC-PCA
Users that are interested in AC-PCA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ChIP-seq peak calling with GC effects adjustment☆10Jul 5, 2018Updated 7 years ago
- Analaysis for the batch correction paper☆12Apr 26, 2025Updated 10 months ago
- Contrastive Poisson latent variable models (CPLVMs)☆11Feb 7, 2022Updated 4 years ago
- ☆18Jan 17, 2019Updated 7 years ago
- An R package for Poisson multivariate adaptive shrinkage.☆11Apr 15, 2024Updated last year
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Estimate genetic correlation using predicted expression☆25Mar 8, 2018Updated 8 years ago
- Annotation-agnostic differential expression analysis of RNA-seq data via expressed regions-level or single base-level approaches☆44Dec 13, 2024Updated last year
- Android Toasts -- Simple user feedback about background operations☆14Oct 7, 2013Updated 12 years ago
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆29Aug 2, 2022Updated 3 years ago
- scLVM is a modelling framework for single-cell RNA-seq data that can be used to dissect the observed heterogeneity into different sources…☆110Dec 16, 2022Updated 3 years ago
- Normalization for single cell RNA-seq data☆51Jun 11, 2025Updated 9 months ago
- ☆28Jul 18, 2024Updated last year
- Perform inference on algorithm-agnostic variable importance in Python☆21May 12, 2022Updated 3 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆34Aug 1, 2024Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Code to support: "pcaReduce: hierarchical clustering of single cell transcriptional profiles"☆20Feb 24, 2024Updated 2 years ago
- Exact Hamiltonian Monte Carlo Sampler for Truncated Multivariate Gaussians☆12Feb 11, 2020Updated 6 years ago
- Ion Torrent SDK Docs☆10Dec 26, 2022Updated 3 years ago
- open source high throughput homogeneous liquid handler ( automated pipette )☆17Sep 20, 2011Updated 14 years ago
- Web synthesizer with face tracking control☆14Feb 17, 2023Updated 3 years ago
- Getting Started with Git and GitHub for R Users☆11Oct 29, 2019Updated 6 years ago
- A scheduler to manage a multi tool dual arm robot while avoiding arm-to-arm collisions; considering complex side constraints; and optimiz…☆11Jul 6, 2021Updated 4 years ago
- stageR package☆13Feb 28, 2023Updated 3 years ago
- Fast Inference of Networks from Directed Regulations☆22Dec 7, 2023Updated 2 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Fitting latent factor mixed models☆13Jun 12, 2020Updated 5 years ago
- ☆25Mar 6, 2026Updated 2 weeks ago
- Software Package for Transcription Factor Binding Site (TFBS) Analysis☆34Mar 12, 2025Updated last year
- logistic factor analysis☆16Jan 29, 2026Updated last month
- Non-negative Independent Factor Analysis for single cell RNA-seq☆11Feb 25, 2022Updated 4 years ago
- ☆29Feb 1, 2023Updated 3 years ago
- ☆10Jan 19, 2019Updated 7 years ago
- Methods used in the article "Assessment of statistical methods from single cell, bulk RNA-seq and metagenomics applied to microbiome data…☆10Jul 13, 2020Updated 5 years ago
- SKATE R Utilities☆10Mar 7, 2026Updated 2 weeks ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- An extensible Ruby on Rails web-service application and database for visualising HTGS data☆18Mar 7, 2014Updated 12 years ago
- A package for reading ABF (binary format used by Axon pCLAMP)☆10Jul 21, 2020Updated 5 years ago
- quickLD, a large-scale, long-range Linkage Disequilibrium analysis tool utilizing parallel CPU, GPU or heterogeneous computing.☆10Jun 10, 2022Updated 3 years ago
- Prepare Sailfish and Salmon output for downstream analysis☆42Jun 6, 2019Updated 6 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Apr 7, 2022Updated 3 years ago
- Using genome-wide markers for polyploid breeding☆12Updated this week
- Repo for Dynamic Statistical Comparisons project☆13Feb 5, 2024Updated 2 years ago