Source code for integrative nonnegative matrix factorization
☆19Jul 12, 2018Updated 7 years ago
Alternatives and similar repositories for iNMF
Users that are interested in iNMF are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Metabolomics experimental design, sample metadata configuration, and sample data acquisition.☆11Jun 28, 2018Updated 7 years ago
- ☆12Oct 27, 2016Updated 9 years ago
- Splotch is a hierarchical generative probabilistic model for analyzing Spatial Transcriptomics (ST) data☆21May 19, 2025Updated last year
- ☆14Oct 9, 2025Updated 7 months ago
- Repository of the pipeline of computational methods for logical modelling of biological networks that are deregulated in diseases, develo…☆10Mar 14, 2026Updated 2 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- NOTE: This package has been renamed to sparrow and will be submitted to Bioconductor 3.14. Please use that package instead. This is kept …☆23Nov 16, 2020Updated 5 years ago
- Scripts for analyses in the Griffin manuscript☆12Dec 14, 2022Updated 3 years ago
- Analaysis for the batch correction paper☆12Apr 26, 2025Updated last year
- CellRegMap: A statistical framework for mapping context-specific regulatory variants using scRNA-seq☆25Aug 20, 2024Updated last year
- R package that performs sparse factor analysis and differential gene expression discovery simultaneously on single-cell CRISPR screening …☆25Oct 3, 2023Updated 2 years ago
- Simplex space operations for compositional data implemented in Python.☆13Feb 17, 2022Updated 4 years ago
- Materials for GCB535 at Penn.☆21Apr 19, 2019Updated 7 years ago
- Single cell pipelines☆16Dec 16, 2024Updated last year
- HiCSR: a Hi-C super-resolution framework for producing highly realistic contact maps☆15Nov 22, 2022Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆22Jul 22, 2025Updated 10 months ago
- ☆12Mar 22, 2023Updated 3 years ago
- scRNA-seq workshop in Oxford on 9 September 2016☆11Sep 7, 2016Updated 9 years ago
- Suite of command-line software for high-performance graphical analysis of ChIP-seq/RNA-seq/ATAC-seq data☆21May 2, 2022Updated 4 years ago
- ☆12Feb 12, 2018Updated 8 years ago
- toolkit for analyzing genome editing experiments☆21May 15, 2026Updated last week
- collection of mass spectrometry imaging workflows☆22Mar 17, 2026Updated 2 months ago
- R package for integrating and analyzing multiple single-cell datasets☆429Feb 4, 2026Updated 3 months ago
- ☆32Apr 23, 2026Updated last month
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Co-expression network management based on WGCNA + k-means☆22May 11, 2021Updated 5 years ago
- Tool kit to accelerate exploratory data analysis and data cleaning☆11Mar 22, 2021Updated 5 years ago
- A scheduler to manage a multi tool dual arm robot while avoiding arm-to-arm collisions; considering complex side constraints; and optimiz…☆11Jul 6, 2021Updated 4 years ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆47Jun 12, 2023Updated 2 years ago
- Python implementation of Combat for data harmonisation, allowing also to remove unwanted effects☆16Oct 30, 2023Updated 2 years ago
- scOntoMatch is an R package which unifies ontology annotation of scRNA-seq datasets to make them comparable across studies☆10Oct 27, 2023Updated 2 years ago
- Variational Bayesian GP-LVM model in MATLAB.☆12Jun 8, 2015Updated 10 years ago
- Contains sample scripts and code to be used with LabKey Server☆11Feb 19, 2026Updated 3 months ago
- Matlab code for fast Hausdorff distance for binary images or segmentation maps☆11Mar 10, 2019Updated 7 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- highly-efficient & lightweight mutation signature matrix aggregation☆19Jan 12, 2022Updated 4 years ago
- CVPR '17 Paper Collection☆10Jul 17, 2017Updated 8 years ago
- Interface to 10x Genomics' 1.3 m single cell data set☆19Aug 2, 2018Updated 7 years ago
- ☆15Nov 15, 2017Updated 8 years ago
- DeepNCM: Deep Nearest Class Mean Classifiers☆13Dec 20, 2018Updated 7 years ago
- Multiclass support matrix machine for single trial EEG classification☆11Jul 9, 2018Updated 7 years ago
- Scripts for medium posts☆26Oct 28, 2019Updated 6 years ago