Alternatives and similar repositories for bollito:

Users that are interested in bollito are comparing it to the libraries listed below

• omnideconv / spacedeconv
  A unified interface to spatial transcriptomics deconvolution tools
  ☆39Updated last week
• KChen-lab / METAFlux
  ☆52Updated 6 months ago
• ZJUFanLab / CellTalkDB
  A manually curated database of literature-supported ligand-receptor interactions in human and mouse
  ☆26Updated 6 months ago
• SGI-LungCancer / SingleCell
  Code repository for single cell RNA-seq
  ☆33Updated 4 years ago
• guokai8 / scGSVA
  scGSVA: Perform GSVA for single cell RNA seq
  ☆52Updated 2 months ago
• cssmillie / ulcerative_colitis
  ☆60Updated 4 years ago
• kerseviciute / aPEAR
  Enrichment Networks for Pathway Enrichment Analysis
  ☆41Updated last year
• liulab-dfci / RIMA_pipeline
  ☆76Updated last year
• FloWuenne / scFunctions
  Functions for single cell data analysis
  ☆29Updated 3 years ago
• HectorRDB / condiments
  Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression
  ☆26Updated last month
• CFeregrino / scWGCNA
  scWGCNA
  ☆56Updated 2 years ago
• buenrostrolab / FigR
  Functional Inference of Gene Regulation
  ☆39Updated 6 months ago
• bei-lab / scRNA-AHCA
  Single-cell transcriptome profiling of an adult human cell atlas of 15 major organs
  ☆39Updated last year
• neurorestore / DE-analysis
  ☆37Updated 3 years ago
• Teichlab / Pan_fetal_immune
  Collection of scripts for analysis of pan fetal immune atlas
  ☆26Updated 2 years ago
• cnio-bu / beyondcell
  Beyondcell is a computational methodology for identifying tumour cell subpopulations with distinct drug responses in single-cell RNA-seq …
  ☆47Updated 4 months ago
• JinmiaoChenLab / ezSingleCell2
  ☆52Updated last year
• LungCellAtlas / scRNAseq_pipelines
  Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas
  ☆31Updated 4 years ago
• genecell / COSG
  Accurate and fast cell marker gene identification with COSG
  ☆40Updated last year
• haniffalab / scRNA-seq_analysis
  Single cell RNA-seq analysis bundle
  ☆34Updated 5 years ago
• quadbio / RNAseq_tutorial
  ☆18Updated 3 months ago
• cailab-tamu / scTenifoldKnk
  R/MATLAB package to perform virtual knockout experiments on single-cell gene regulatory networks.
  ☆42Updated 2 weeks ago
• scCOVID-19 / COVIDPBMC
  Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection
  ☆40Updated 3 years ago
• BradBalderson / Cytocipher
  Analysis methods for analysing single cell RNA-seq data; particularly with the goal of checking if tentative clusters of cells are signif…
  ☆33Updated last year
• effiken / Leader_et_al
  ☆15Updated 2 years ago
• alserglab / mascarade
  ☆24Updated 2 weeks ago
• jackbibby1 / SCPA
  R package for pathway analysis in scRNA-seq data
  ☆66Updated 5 months ago
• sridnona / cb_sniffer
  mutation(barcode) caller for 10x single cell data
  ☆44Updated 4 years ago
• arc85 / celltalker
  Inference of cell-cell communication from single-cell RNAseq data
  ☆47Updated last year
• lusystemsbio / NetAct
  Network construction Algorithm
  ☆20Updated 4 months ago