☆27Jun 5, 2025Updated 11 months ago
Alternatives and similar repositories for scAnno
Users that are interested in scAnno are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Automated ingestion and conversion of various single-cell data formats, within and across species☆13Jan 26, 2026Updated 3 months ago
- Functional Annotation for Single-Cell Transcriptomics☆12Jun 29, 2024Updated last year
- Repository for "Effective methods for bulk RNA-seq deconvolution using scRNA-seq and snRNA-seq derived transcriptomes"☆17Jul 9, 2023Updated 2 years ago
- CellAnn☆12Nov 3, 2023Updated 2 years ago
- Combined clonality and transcriptome scRNAseq clustering method☆11Dec 3, 2022Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆12Nov 19, 2023Updated 2 years ago
- ☆10Jan 21, 2023Updated 3 years ago
- Research Software Design by Example☆13Sep 7, 2025Updated 8 months ago
- ☆17Jan 13, 2024Updated 2 years ago
- ☆23Apr 17, 2026Updated 3 weeks ago
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )☆36Jan 6, 2022Updated 4 years ago
- Run any CLI tool on a Reproducible Isolated Environment ⚙️⚡☆14Apr 30, 2026Updated last week
- A visualization software for antibody multi sequence alignment☆22Jun 15, 2024Updated last year
- ☆19Feb 23, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Analaysis for the batch correction paper☆12Apr 26, 2025Updated last year
- digitalDLSorteR: An R package to deconvolute bulk RNA-Seq using scRNA-Seq data☆16Oct 31, 2024Updated last year
- An R package for time course sequencing data analysis☆21May 8, 2023Updated 3 years ago
- Human Endometrial Cell Atlas (HECA). An integrated single-cell reference atlas of the human endometrium.☆31Jun 19, 2024Updated last year
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Oct 25, 2024Updated last year
- An R package for visualising cell-cell interactions☆47Mar 16, 2026Updated last month
- R package for analysing single cell data☆64Dec 8, 2022Updated 3 years ago
- Gain biological insights using LLM.☆15Jan 26, 2026Updated 3 months ago
- Code for "Feature selection methods affect the performance of scRNA-seq data integration and querying"☆32Mar 15, 2025Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Bioconductor components for general cancer genomics☆11Feb 5, 2023Updated 3 years ago
- ☆22Mar 6, 2023Updated 3 years ago
- Python implementation of Gene Trajectory☆30Sep 4, 2024Updated last year
- Draw heatmap simply using a tidy data frame☆361Feb 7, 2026Updated 3 months ago
- B-cell and T-cell Adaptive Immune Receptor Repertoire (AIRR) sequencing analysis pipeline using the Immcantation framework☆76Apr 30, 2026Updated last week
- Functions to analyze copy number aberrations in single-cell data☆13Feb 3, 2025Updated last year
- Pan-Cancer Single Cell Classifier☆85May 30, 2024Updated last year
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆15Jul 5, 2023Updated 2 years ago
- ☆26Dec 10, 2025Updated 4 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- KDS software for Kinase Drug Selectivity☆11Jun 8, 2023Updated 2 years ago
- 🔬 R package: Analysis of Large Affymetrix Microarray Data Sets☆12Dec 14, 2025Updated 4 months ago
- inferring cell-cell communication from scRNA-seq of ligand-receptor☆88Oct 6, 2023Updated 2 years ago
- ☆13Dec 5, 2024Updated last year
- p-IgGen: A Generative Paired Antibody Language Model☆13May 6, 2025Updated last year
- cell type deconvolution for multi-condition bulk RNA-seq data☆33Feb 28, 2022Updated 4 years ago
- Integrative analysis for scRNA-seq and scTCR-/scBCR-seq data☆21Apr 29, 2026Updated last week