Workflow to reproduce results and figures for the second BeatAML manuscript
☆18Jun 28, 2022Updated 4 years ago
Alternatives and similar repositories for beataml2_manuscript
Users that are interested in beataml2_manuscript are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Analysis notebooks and data for AML hierarchies paper☆20Jun 28, 2023Updated 3 years ago
- Computational identification of targets for CAR-T cell therapy in AML☆22Dec 25, 2022Updated 3 years ago
- CNApp represents the first web tool to perform a comprehensive and integrative analysis of copy number alterations (CNAs) in a user-frien…☆21Jan 17, 2020Updated 6 years ago
- The following code accompanies a manuscript combining single-cell RNA-sequencing and genotyping to analyze cellular hierarchies in acute …☆47Apr 8, 2020Updated 6 years ago
- ASCETIC (Agony-baSed Cancer EvoluTion InferenCe) is a novel framework for the inference of a set of statistically significant temporal pa…☆12Apr 18, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A Snakemake pipeline for cellranger to process 10x single-cell RNAseq data☆16Oct 15, 2019Updated 6 years ago
- A single cell RNA-seq reference map of human hematopoietic development in the bone marrow, with balanced representation of hematopoietic …☆99Mar 6, 2026Updated 6 months ago
- Haplotype-aware Hidden Markov Models for detecting CNVs from bulk RNA-seq☆13Apr 2, 2024Updated 2 years ago
- Streamlining SLAM-seq analysis with ultra-high sensitivity☆49May 22, 2024Updated 2 years ago
- Analaysis for the batch correction paper☆12Apr 26, 2025Updated last year
- ☆12Aug 2, 2020Updated 6 years ago
- ☆22Apr 16, 2024Updated 2 years ago
- Run Picard on BAM files and collate 90 metrics into one file.☆40Sep 27, 2017Updated 8 years ago
- TEProf2 Pipeline used to find promoters and predict protein sequences from RNA-sequencing data☆30May 5, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Survival Support Vector Analysis☆20Apr 4, 2025Updated last year
- 2021/7/9测试KwaiSurvival的实验代码☆11Aug 17, 2021Updated 5 years ago
- Skip the peaks and expose RNA-binding in CLIP data☆10Sep 3, 2026Updated 2 weeks ago
- The R package scCODE, a platform for data-specific DE gene detection for scRNA-seq data☆15Nov 9, 2023Updated 2 years ago
- ☆18Apr 17, 2025Updated last year
- Hybrid Learning for Feature Fusion of Diffuse Large B-cell Lymphoma Segmentation in PET-CT Images☆10Jun 1, 2021Updated 5 years ago
- ☆10Jul 16, 2021Updated 5 years ago
- Additional code and analysis from the single-cell integration benchmarking project☆75Dec 19, 2022Updated 3 years ago
- Work supporting the comparison of SnpEff and VEP effect prediction and HGVS identifiers☆11Mar 15, 2017Updated 9 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- code for 'Cell Types of Origin of the Cell Free Transcriptome' by Vorperian et al☆19Feb 22, 2022Updated 4 years ago
- ☆27Jun 5, 2025Updated last year
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆27Oct 17, 2024Updated last year
- ☆11Mar 5, 2025Updated last year
- Gene set enrichment analysis for single-cell RNAseq data☆31Feb 17, 2023Updated 3 years ago
- data gateway system getting real-time tick data from Shanghai Future Exchange☆13Dec 8, 2019Updated 6 years ago
- A portable and fast single cell type identifier☆64May 12, 2021Updated 5 years ago
- git for the Bioconductor package "sangerseqR"☆13Apr 1, 2024Updated 2 years ago
- Utilizing single-cell omics from patients tumor to predict response and resistance.☆75Apr 25, 2023Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆16Mar 16, 2017Updated 9 years ago
- collection of data structures and algorithms☆19Mar 19, 2019Updated 7 years ago
- Somatic point mutation caller☆34Jan 7, 2026Updated 8 months ago
- AnceTran2.0: R package for transcriptome evolution analysis based on RNA-seq expression data or ChIP-seq TF-binding data☆12May 19, 2019Updated 7 years ago
- Detection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.☆38Aug 6, 2026Updated last month
- ☆21Oct 27, 2023Updated 2 years ago
- ☆23Jan 20, 2021Updated 5 years ago