plantinformatics / pretzelLinks
Javascript full-stack framework for Big Data visualisation and analysis
☆46Updated last week
Alternatives and similar repositories for pretzel
Users that are interested in pretzel are comparing it to the libraries listed below
Sorting:
- Predict genic elements as splice sites, exons or genes, along eukaryotic DNA sequences☆18Updated 3 years ago
- kProcessor: kmers processing framework.☆10Updated 2 years ago
- Catalogue of pairwise alignment algorithms and benchmarks☆25Updated last month
- GeneValidator: Identify problems with predicted genes☆49Updated last year
- Merge transcriptome assemblies☆31Updated 9 years ago
- BEAST 2 package which provides support for multi-type trees: phylogenetic trees on structured populations.☆21Updated 6 months ago
- Program to run the SOWH test (likelihood-based test used to compare tree topologies which are not specified a priori)☆11Updated last year
- Combine reference and assembled transcriptomes for RNA-Seq analysis☆23Updated 6 years ago
- Teaching modules for Human Genome Variation Lab.☆20Updated 8 months ago
- Docker containers for bioinformatics with a small footprint☆23Updated last month
- Code for the Brassica oleracea/rapa/napus genomic comparison☆16Updated 4 years ago
- MapCaller – An efficient and versatile approach for short-read alignment and variant detection in high-throughput sequenced genomes☆30Updated 5 years ago
- PERF is an Exhaustive Repeat Finder☆33Updated 4 years ago
- reference free variant assembly☆34Updated 2 years ago
- Visualization tool for (meta)genome assembly graphs☆22Updated this week
- Validate and edit small eukaryotic genome assemblies☆32Updated 2 years ago
- Analysis of the population diversity of SARS-CoV-2 within and between individual patients☆15Updated 5 years ago
- ☆28Updated 3 years ago
- Tetemer, an R package and Shiny app for interactively fitting population parameters to k-mer spectra of diploids, triploids, and tetraplo…☆15Updated last year
- Day 2 of ACAD's 2018 Advanced Bioinformatics Workshop☆12Updated 7 years ago
- Screening Historical Events of Recombination in a Phylogeny via Ancestral Sequences☆10Updated 5 months ago
- A fast and space-efficient pre-filter for estimating the quantification of very large collections of nucleotide sequences☆14Updated last week
- ☆20Updated 2 years ago
- "The who the what the huh?" is our pipeline for converting bcl files to fastq and performing QC.☆11Updated 3 years ago
- Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes☆31Updated last year
- A dotplot generator for large chromosomes☆43Updated 2 years ago
- abi2fastq is a small utility to convert Sanger sequencing reads in .abi (applied biosystems) format to FASTQ☆11Updated 8 years ago
- Phylogenetic Clustering by Linear Integer Programming (PhyCLIP)☆19Updated 5 years ago
- Functional annotation pipeline for proteins from non-model organisms implemented in Nextflow☆19Updated 3 years ago
- ☆12Updated 11 months ago