Javascript full-stack framework for Big Data visualisation and analysis
☆46Jul 21, 2026Updated this week
Alternatives and similar repositories for pretzel
Users that are interested in pretzel are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Scripts to do haplotype analysis on pan genomes.☆20Sep 24, 2020Updated 5 years ago
- An integrated high performance bioinformatics toolkit☆23Apr 24, 2019Updated 7 years ago
- recompute GFA link overlaps☆26Sep 14, 2022Updated 3 years ago
- ☆15Aug 22, 2023Updated 2 years ago
- ☆15Jul 3, 2018Updated 8 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Just Another JAva Package for Sequence Analysis☆24Dec 2, 2022Updated 3 years ago
- Bayesian Multi-Trait Multi-Environment for genomic selection[R package] [Dev version]☆19Aug 6, 2023Updated 2 years ago
- Singularity port of HLA typing based on an input exome BAM file and is currently infers infers alleles for the three major MHC class I (…☆14Jan 15, 2017Updated 9 years ago
- A tool for recovering synteny blocks from multiple alignment☆33Oct 18, 2021Updated 4 years ago
- extract MSAs from genome variation graphs☆34Mar 24, 2026Updated 4 months ago
- Phasing of dikaryotic fungal genome assemblies☆13Mar 1, 2023Updated 3 years ago
- Rust implementation of Flavia95's GFAtoVCF☆16Jan 17, 2022Updated 4 years ago
- Pipeline for genome scaffolding by modelling distributions of HiC pairs☆11Dec 7, 2022Updated 3 years ago
- de Bruijn graph cOrrectiOn from graph aLignment☆11Jul 20, 2020Updated 6 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Draw genetic map (linkage map) in R☆14Nov 12, 2017Updated 8 years ago
- ☆27May 22, 2025Updated last year
- ☆10Jun 9, 2020Updated 6 years ago
- Useful guide to help GCSE maths students☆13Jun 27, 2021Updated 5 years ago
- Two pass alignment for long reads☆22Mar 9, 2021Updated 5 years ago
- Very large scale k-mer counting and analysis on Apache Spark.☆19Jul 9, 2026Updated 2 weeks ago
- Fast-SG: An alignment-free algorithm for ultrafast scaffolding graph construction from short or long reads.☆23May 29, 2018Updated 8 years ago
- AccuSyn: An Accurate Web-based Genome Synteny Browser☆16Aug 27, 2024Updated last year
- Predicting oncogenic potential of gene fusions☆13Feb 13, 2016Updated 10 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Scotch pipeline for indel calling.☆10Nov 25, 2019Updated 6 years ago
- Read nanopore sequence reads in real-time☆14Feb 9, 2017Updated 9 years ago
- Genetic maps in autopolyploids☆33Jan 12, 2026Updated 6 months ago
- toolkit for file system virtualisation of random access compressed FASTA, FAI, DICT & TWOBIT files☆22Updated this week
- NovoGraph: building whole genome graphs from long-read-based de novo assemblies☆46Feb 23, 2021Updated 5 years ago
- Transforming field research by overcoming the ‘digitisation bottleneck’, and reducing the cost of creating digital and FAIR-compliant dat…☆25Updated this week
- Combine reference and assembled transcriptomes for RNA-Seq analysis☆24Feb 12, 2020Updated 6 years ago
- Digital Database of Microbial Phenotypes. Like an online Bergey's Manual.☆14Mar 1, 2012Updated 14 years ago
- an ensemble usage of MAFFT-linsi --add on large datasets☆13May 31, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Annotation of cryptic transposon variants using Hidden Markov Models to detect conserved terminal features.☆10Jul 3, 2026Updated 3 weeks ago
- CARE: Context-Aware Read Error correction for Illumina reads☆21Nov 1, 2023Updated 2 years ago
- ☆15May 31, 2020Updated 6 years ago
- Next Index to Query Kmer Intersection☆17Feb 1, 2023Updated 3 years ago
- Plant breeding simulations with AlphaSimR☆30Jan 5, 2025Updated last year
- ☆12Nov 23, 2020Updated 5 years ago
- Hybrid Error Correction of Long Reads using Iterative Learning☆10Sep 27, 2018Updated 7 years ago