njau-sri / rtm-gwas
An innovative GWAS procedure for studies on germplasm population and plant breeding
☆13Updated 4 years ago
Alternatives and similar repositories for rtm-gwas:
Users that are interested in rtm-gwas are comparing it to the libraries listed below
- repository for code used in analysis of open wild wheat consortium☆15Updated 3 years ago
- ☆9Updated 4 years ago
- Build haplotye and generate figures☆18Updated 3 years ago
- The GitHub repository for the A. thaliana pan-NLR'ome project.☆16Updated 5 years ago
- hot_scan is a free software to detect genomic regions unusually rich (hotspot) in a given pattern via scan statistics☆7Updated 11 years ago
- ☆11Updated 2 years ago
- R package for binmap☆13Updated last year
- ☆12Updated 5 months ago
- DataColor: Unveiling Biological Data Relationships through Distinctive Color Mapping☆16Updated last year
- Method used in the study on germline mutation rate estimation in 68 species of vertebrates.☆14Updated 3 years ago
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated 2 months ago
- ☆12Updated 4 years ago
- Scripts to do haplotype analysis on pan genomes.☆21Updated 4 years ago
- ☆16Updated 5 years ago
- This is a basic repository with all the scripts necessary to reconstruct the data analysis from our work on the 200 Genomes☆11Updated 6 years ago
- Split-read pipeline for the identification of non-reference TE insertions with TSDs☆24Updated 4 years ago
- ☆21Updated 6 years ago
- ☆15Updated last year
- Automated Rice Variant calling workflow for HPC, Cloud and Desktop systems.☆12Updated 9 months ago
- Draw genetic map (linkage map) in R☆11Updated 7 years ago
- ☆12Updated 9 months ago
- Scripts to convert between file formats for various analyses☆15Updated last week
- Tao Yan's Plot Toolkit☆11Updated 5 years ago
- A haplotype analysis toolkit for natural variation study.☆29Updated last year
- ☆14Updated 3 years ago
- RRSelection: A linkage disequilibrium method to detect selection region across population VCF☆14Updated 6 years ago
- This tool performs an automatic identification, annotation, and analysis of the MYB gene family in plants. It can be applied to new trans…☆17Updated 7 months ago
- QTL mapping with binmap data☆17Updated 5 years ago
- ☆14Updated last year
- Perform GWAS with gemma in a simple pipeline☆25Updated 2 years ago