pfaucon / PBSIM-PacBio-SimulatorLinks
This is an updated mirror of the original PacBio Read Simulator
☆38Updated 7 years ago
Alternatives and similar repositories for PBSIM-PacBio-Simulator
Users that are interested in PBSIM-PacBio-Simulator are comparing it to the libraries listed below
Sorting:
- PBSIM2: a simulator for long read sequencers with a novel generative model of quality scores☆73Updated 2 years ago
- ☆78Updated 5 years ago
- MarginPolish: Graph based assembly polishing☆46Updated 4 years ago
- vcfdist: Accurately benchmarking phased variant calls☆83Updated 3 weeks ago
- ☆66Updated last year
- Reference-based variant calling pipeline for a pair of phased haplotype assemblies☆103Updated 4 years ago
- GraphMap - A highly sensitive and accurate mapper for long, error-prone reads http://www.nature.com/ncomms/2016/160415/ncomms11307/full/n…☆68Updated 3 years ago
- A C++ library and utilities for manipulating the Graphical Fragment Assembly format.☆54Updated 3 years ago
- ☆46Updated 5 years ago
- Scalable long read self-correction and assembly polishing with multiple sequence alignment☆53Updated last year
- a long-read error correction tool using the multi-string Burrows Wheeler Transform☆45Updated 5 years ago
- A local-haplotagging-based small and structural variant caller☆85Updated this week
- A EXPERIMENTAL fork of minimap2 optimized for assembly-to-reference alignment☆87Updated 4 years ago
- alignment to variation graph inducer☆149Updated 3 months ago
- Bidirectional WFA (Paper)☆47Updated last year
- ☆81Updated 7 months ago
- Banded Striped DNA Sequence Alignment☆47Updated 2 years ago
- Genome Pair Rapid Dotter☆66Updated 4 years ago
- ☆117Updated 3 weeks ago
- Pipeline to convert a haploid assembly into diploid☆103Updated 8 months ago
- ☆60Updated 4 years ago
- Graphical interactive tool for the visualization of sequence graphs in GFA format.☆70Updated 6 years ago
- Pangenome graphs (review article on graph-based pangenomic methods)☆72Updated 5 years ago
- Tools for detecting DNA modifications from single molecule, real-time sequencing data☆26Updated 3 years ago
- ☆66Updated last month
- Estimating k-mer coverage histogram of genomics data☆76Updated last year
- Nanopore raw signal repeat detection pipeline☆45Updated 2 years ago
- Call select base modifications in PacBio HiFi reads☆13Updated 8 months ago
- ☆117Updated last month
- Data from the Human PanGenomics Project☆60Updated 4 years ago