BGI-Qingdao / HicTrioBinningView external linksLinks
☆12Nov 29, 2022Updated 3 years ago
Alternatives and similar repositories for HicTrioBinning
Users that are interested in HicTrioBinning are comparing it to the libraries listed below
Sorting:
- A scaffold assembling pipeline for stLFR reads.☆14Mar 15, 2021Updated 4 years ago
- Metagenomics Taxonomic Reads Assembly Single-Species☆16May 25, 2023Updated 2 years ago
- SRY: an effective method for sorting long-read of sex-limited (Y or W) chromosome.☆19Aug 1, 2023Updated 2 years ago
- Code used in article "Uncovering the transcriptional regulatory network involved in boosting wheat regeneration and transformation".☆12Mar 21, 2023Updated 2 years ago
- ☆26Jan 26, 2026Updated 3 weeks ago
- The complete sequence of a Chinese individual☆11Oct 8, 2024Updated last year
- A tool to use stereo-seq GEM and ssDNA to generate single-cell and 3D spatial resolved transtriptomics data☆13Oct 12, 2023Updated 2 years ago
- ☆12Mar 3, 2023Updated 2 years ago
- VT3D: a versatile Visualization Toolbox for 3D spatial transcriptomics atlas☆14Nov 6, 2024Updated last year
- Compare different genome alignment tools using a wide range of genomes with different complexities.☆14Dec 3, 2022Updated 3 years ago
- issues for semina "Data Visulization"☆13Dec 23, 2025Updated last month
- Genome Assembly Validation via Inter-SUNK distances in ONT reads☆15Feb 20, 2023Updated 2 years ago
- Draw a dot plot from a paf alignment☆38Sep 18, 2025Updated 4 months ago
- A gap-closing software tool that uses long reads to enhance genome assembly.☆23Apr 25, 2024Updated last year
- A comprehensive tool to infer TF-centred, spatial gene regulatory networks for the spatially resolved transcriptomic data.☆19Apr 27, 2025Updated 9 months ago
- Very simple and configurable all-in-one dotplot program☆14Apr 1, 2023Updated 2 years ago
- Centromere mapping and annotation pipeline☆22Updated this week
- conserved non-coding sequence☆16Feb 21, 2022Updated 3 years ago
- ☆41May 19, 2025Updated 8 months ago
- ☆19Apr 24, 2022Updated 3 years ago
- HAST: Haplotype-Resolved Assembly for Synthetic Long Reads Using A Trio-Binning Strategy☆18Apr 20, 2023Updated 2 years ago
- plot genome alignment synteny☆21May 25, 2020Updated 5 years ago
- A pipeline to de novo assemble the stLFR reads using Supernova Assembler☆20Feb 22, 2023Updated 2 years ago
- Code repository for the T2T-Y paper☆24Jul 11, 2023Updated 2 years ago
- Scripts that used in our chicken T2T manuscript.☆22Jan 14, 2026Updated last month
- A gap-closing software tool that uses long reads to enhance genome assembly.☆231Sep 6, 2024Updated last year
- ☆27Jun 26, 2025Updated 7 months ago
- ☆119Oct 10, 2025Updated 4 months ago
- De novo chromosome-level scaffolding and phasing tool using Hi-C☆29Nov 23, 2025Updated 2 months ago
- convert PAF format to CHAIN format☆34May 14, 2025Updated 9 months ago
- ☆28Mar 4, 2022Updated 3 years ago
- Make colorful identity heatmaps of genomic sequence☆128May 24, 2024Updated last year
- Burrows-Wheeler Aligner for x86,x86_64, arm and aarch64 architectures (PC, Raspberry PI, ODROID, M1)☆10Apr 13, 2022Updated 3 years ago
- Python binding for KCP☆28Mar 27, 2021Updated 4 years ago
- ☆31Updated this week
- Identify and find telomeres, or telomeric repeats in a genome.☆158Nov 24, 2025Updated 2 months ago
- A tool for performing collinearity-incorporating homology inference☆33Oct 7, 2023Updated 2 years ago
- Algorithm For Gene Order Reconstruction in Ancestors☆80Aug 16, 2025Updated 6 months ago
- Annotate Olfactory receptor CDS from genome☆10Apr 29, 2023Updated 2 years ago