A tool for Racon polishing of miniasm assemblies
☆82Jul 24, 2026Updated 2 weeks ago
Alternatives and similar repositories for Minipolish
Users that are interested in Minipolish are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Peregrine: Fast Genome Assembler Using SHIMMER Index☆102Feb 6, 2022Updated 4 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆35Dec 11, 2019Updated 6 years ago
- Benchmarking of long-read assembly tools for bacterial whole genomes☆172Mar 15, 2021Updated 5 years ago
- De novo assembler for single molecule sequencing reads using repeat graphs☆949Apr 3, 2026Updated 4 months ago
- Validate and edit small eukaryotic genome assemblies☆32Apr 28, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A tool for removing redundant genomes from a set of assemblies☆84Jul 24, 2026Updated 2 weeks ago
- De novo genome assembler for long uncorrected reads☆232Nov 15, 2023Updated 2 years ago
- A tool for generating consensus long-read assemblies for bacterial genomes☆347Jul 24, 2026Updated 2 weeks ago
- Layout module for raw de novo genome assembly of long uncorrected reads.☆21Feb 2, 2021Updated 5 years ago
- quality filtering tool for long reads☆412Sep 17, 2025Updated 10 months ago
- A single molecule sequence assembler for genomes large and small.☆707Jun 18, 2026Updated last month
- ✏️ Genome assembly polishing & SNV detection☆74Jun 12, 2026Updated 2 months ago
- DNA assembler developed on FER (Croatia), RBI (Croatia) and GIS (Singapore)☆18Jan 18, 2016Updated 10 years ago
- [MOVED] Moved to paoloshasta/shasta. De novo assembly from Oxford Nanopore reads☆272Oct 13, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Ultrafast de novo assembly for long noisy reads (though having no consensus step)☆356Jul 19, 2025Updated last year
- Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads☆241Dec 29, 2023Updated 2 years ago
- Redbean: A fuzzy Bruijn graph approach to long noisy reads assembly☆531Sep 27, 2023Updated 2 years ago
- Hybrid error correction of long reads using colored de Bruijn graphs☆108Jan 17, 2026Updated 6 months ago
- Long read aligner☆115May 26, 2023Updated 3 years ago
- HyPo: Super Fast & Accurate Polisher for Long Read Genome Assemblies☆67Feb 23, 2020Updated 6 years ago
- ☆35Feb 20, 2020Updated 6 years ago
- Sequence correction provided by ONT Research☆520May 20, 2026Updated 2 months ago
- hybrid assembly pipeline for bacterial genomes☆650Jul 29, 2026Updated 2 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- a Bioinformatics Application for Navigating De novo Assembly Graphs Easily☆672Jul 7, 2026Updated last month
- GFA insert into GenomicSQLite☆49Jun 7, 2021Updated 5 years ago
- alignment to variation graph inducer☆163Jul 29, 2026Updated 2 weeks ago
- GraphMap - A highly sensitive and accurate mapper for long, error-prone reads http://www.nature.com/ncomms/2016/160415/ncomms11307/full/n…☆68Aug 30, 2022Updated 3 years ago
- Fast and accurate genomic distances using HyperLogLog☆162Jan 19, 2023Updated 3 years ago
- ☆278Jun 26, 2025Updated last year
- Long read / genome alignment software☆329Dec 16, 2025Updated 7 months ago
- Pipeline for analysing intergenic regions in bacteria☆39Oct 25, 2019Updated 6 years ago
- a toolset for fast DNA read set matching and assembly using a new type of reduced kmer☆36Aug 4, 2021Updated 5 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Reference-based variant calling pipeline for a pair of phased haplotype assemblies☆115Jun 6, 2021Updated 5 years ago
- Graph based multi genome aligner☆49Sep 17, 2021Updated 4 years ago
- Flip-flop basecaller for Oxford Nanopore reads☆97Jan 13, 2022Updated 4 years ago
- Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads. http://genome.cshlp.org/content/early/2017/01/18/gr…☆300May 9, 2024Updated 2 years ago
- A fast K-mer counter for high-fidelity shotgun datasets☆147Jan 19, 2026Updated 6 months ago
- recompute GFA link overlaps☆26Sep 14, 2022Updated 3 years ago
- Filter of Pairwise Alignement☆45Jan 31, 2022Updated 4 years ago