PacificBiosciences / PacBioFileFormats
Specifications for PacBio® native file formats
☆30Updated 5 months ago
Alternatives and similar repositories for PacBioFileFormats
Users that are interested in PacBioFileFormats are comparing it to the libraries listed below
Sorting:
- ☆24Updated 2 months ago
- Genome scaffolding based on HiC data in heterozygous and high ploidy genomes☆60Updated 4 months ago
- Exact Tandem Repeat Finder (not a TRF replacement)☆49Updated 5 years ago
- deSALT - De Bruijn graph-based Spliced Aligner for Long Transcriptome reads☆44Updated 2 years ago
- FALCON-Phase integrates PacBio long-read assemblies with Phase Genomics Hi-C data to create phased, diploid, chromosome-scale scaffolds☆74Updated 4 years ago
- MarginPolish: Graph based assembly polishing☆46Updated 4 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆37Updated 5 years ago
- Evaluate variant calls and its combination with k-mer multiplicity☆66Updated 2 years ago
- ☆27Updated this week
- Scalable long read self-correction and assembly polishing with multiple sequence alignment☆55Updated last year
- In-depth characterization and annotation of differences between two sets of DNA sequences☆60Updated 5 years ago
- Converting and demultiplexing of PacBio BAM files into gzipped fasta and fastq files.☆37Updated 2 years ago
- ☆48Updated 10 months ago
- a hidden Markov model to infer simple repeats from genome sequences☆36Updated 4 years ago
- Correct and scaffold assemblies using long reads☆51Updated last year
- ☆79Updated 2 months ago
- Structural variant caller☆54Updated 3 years ago
- Pipeline for scaffolding and breaking a genome assembly using 10x genomics linked-reads☆22Updated 2 years ago
- vcfdist: Accurately benchmarking phased variant calls☆80Updated 2 weeks ago
- Structural variant (SV) analysis tools☆36Updated 10 months ago
- WDL workflows for variant calling and assembly using ONT☆34Updated this week
- HiFi-based caller for highly similar paralogous genes☆41Updated 2 weeks ago
- ☆30Updated 9 months ago
- Dot: An interactive dot plot viewer for comparative genomics☆33Updated 2 years ago
- Long read alignment analysis. Generate a reports on sequence alignments for mappability vs read sizes, error patterns, annotations and r…☆47Updated 6 years ago
- Pipeline for structural variant image curation and analysis.☆48Updated 3 years ago
- Workflow to prepare high accuracy single molecule consensus sequences from amplicon data using unique molecular identifiers☆33Updated last year
- Hitting associations with k-mers☆45Updated 3 years ago
- An easy way to run BioNano genomic analysis☆27Updated 4 years ago
- Simple convertor from bam to FASTQ☆26Updated 9 years ago