PacificBiosciences / PacBioFileFormatsLinks
Specifications for PacBio® native file formats
☆31Updated last year
Alternatives and similar repositories for PacBioFileFormats
Users that are interested in PacBioFileFormats are comparing it to the libraries listed below
Sorting:
- Error correction of ONT transcript reads☆58Updated 2 years ago
- Exact Tandem Repeat Finder (not a TRF replacement)☆50Updated 6 years ago
- Structural variant caller☆55Updated 3 years ago
- Structural variant merging tool☆55Updated last year
- ☆83Updated 8 months ago
- Genome scaffolding based on HiC data in heterozygous and high ploidy genomes☆60Updated 10 months ago
- Code for phasing SVs with SNPs☆52Updated 5 years ago
- UCSC Nanopore☆44Updated 6 years ago
- ☆27Updated 9 months ago
- Converting and demultiplexing of PacBio BAM files into gzipped fasta and fastq files.☆39Updated 2 years ago
- Long read alignment analysis. Generate a reports on sequence alignments for mappability vs read sizes, error patterns, annotations and r…☆49Updated 7 years ago
- MarginPolish: Graph based assembly polishing☆47Updated 5 years ago
- Public Benchmark of Long-Read Structural Variant Caller on PacBio CCS HG002 Data☆51Updated 4 years ago
- In-silico PCR, primer design and padlock design for in-situ sequencing☆52Updated 3 months ago
- A snakemake pipeline for SV analysis from nanopore genome sequencing☆52Updated 5 years ago
- ☆78Updated 5 years ago
- DNA methylation analysis downstream to Nanopolish for Oxford Nanopore DNA sequencing datasets☆34Updated 4 years ago
- ☆49Updated last year
- My collection of light bioinformatics analysis pipelines for specific tasks☆76Updated last year
- catalog for long-read sequencing tools☆32Updated 2 years ago
- My experimental tools on top of htslib. NOT OFFICIAL!!!☆58Updated 2 months ago
- Methylation Phasing for Nanopore Sequencing☆49Updated 2 years ago
- Reference-based variant calling pipeline for a pair of phased haplotype assemblies☆104Updated 4 years ago
- Generate unique KMERs for every contig in a FASTA file☆48Updated 3 years ago
- heuristics to merge structural variant calls in VCF format.☆38Updated 9 years ago
- Structural Variants Pipeline for Long Reads☆44Updated 7 years ago
- Tools for detecting DNA modifications from single molecule, real-time sequencing data☆26Updated 3 years ago
- ☆49Updated last year
- A method for variant graph genotyping based on exact alignment of k-mers☆87Updated 6 years ago
- Pauvre: QC and genome browser plotting Oxford Nanopore and PacBio long reads.☆54Updated last year