BELLA: a Computationally-Efficient and Highly-Accurate Long-Read to Long-Read Aligner and Overlapper
☆52May 16, 2022Updated 3 years ago
Alternatives and similar repositories for BELLA
Users that are interested in BELLA are comparing it to the libraries listed below
Sorting:
- LOGAN: High-Performance Multi-GPU X-Drop Long-Read Alignment.☆30Sep 23, 2022Updated 3 years ago
- Peregrine: Fast Genome Assembler Using SHIMMER Index☆102Feb 6, 2022Updated 4 years ago
- An algorithm for centromere assembly using long error-prone reads☆25May 25, 2021Updated 4 years ago
- Tool (experimental) to compute layout from overlaps with spectral algorithm☆11Nov 28, 2017Updated 8 years ago
- Minhash Index Extended to Knead Kmer Intersection☆11Mar 18, 2020Updated 6 years ago
- ☆14Jan 31, 2020Updated 6 years ago
- Pan-genome Seed Index☆20Mar 12, 2025Updated last year
- Practical Dynamic de Bruijn Graphs☆18Oct 1, 2020Updated 5 years ago
- Suite of tools for use in genome assembly and consensus. Work in progress.☆31Mar 22, 2021Updated 4 years ago
- Long read to reference genome mapping tool☆13Mar 14, 2024Updated 2 years ago
- a toolset for efficient analysis of 10X Genomics linked read data sets, in particular for de novo assembly☆15Nov 27, 2019Updated 6 years ago
- Archived version 1.0.2☆16Nov 25, 2019Updated 6 years ago
- Software accompanying "HINGE: Long-Read Assembly Achieves Optimal Repeat Resolution"☆64Oct 15, 2020Updated 5 years ago
- Filter of Pairwise Alignement☆44Jan 31, 2022Updated 4 years ago
- Parallel String Graph Construction, Transitive Reduction, and Contig Generation for De Novo Genome Assembly☆16Jun 11, 2024Updated last year
- Iterative error correction of long reads