Adapsyn / prism-4-paperLinks
☆18Updated 4 years ago
Alternatives and similar repositories for prism-4-paper
Users that are interested in prism-4-paper are comparing it to the libraries listed below
Sorting:
- SMBGC Annotation using Neural Networks Trained on Interpro Signatures☆29Updated 6 months ago
- Bioinformatic Tools for study Evolution of metabolic diversity☆35Updated last year
- Metagenome analysis using the Kraken software suite☆35Updated 3 years ago
- A metagenomic strategy for harnessing the chemical repertoire of the human microbiome☆33Updated 4 months ago
- Improved Inference of Ortholog Groups using Hidden Markov Models☆37Updated last month
- Pipeline for major biological analyses.☆35Updated 3 years ago
- ☆18Updated 4 years ago
- A Python package for discovery, annotation, and analysis of gene clusters in genomics or metagenomics data sets.☆21Updated 4 years ago
- metabolic heatmap☆21Updated 6 years ago
- Workflow to rapidly quantify taxa from all domains of life, directly from short-read human gut metagenomes☆64Updated last month
- An R interface to the omixer-rpm for turning metagenomic functional profiles into pathway/module profiles☆12Updated 2 years ago
- Machine-learning-based general bacterial promoter prediction tool.☆51Updated 2 years ago
- ☆31Updated 4 years ago
- BiG-MEx implementation as Docker images and R packages☆13Updated 3 years ago
- ☆11Updated 7 months ago
- Integrative virome pipeline☆13Updated 11 months ago
- KBase distribution module for RASTtk.☆13Updated 5 years ago
- A package to annotate protein sequences☆60Updated 8 months ago
- The Microbial Co-occurrence Network Explorer☆21Updated 2 years ago
- A pipeline for high-quality bacterial genome construction using ONT sequencing☆39Updated 3 years ago
- Pipeline to design taxon-specific primes in defined bacterial communities.☆23Updated 9 months ago
- Pipeline for metagenomic community analysis using DNA isolated from virus-like particles☆13Updated 5 years ago
- Database and pipeline for protein structure-guided annotations of ecologically relevant functions at the metagenome scale.☆23Updated last month
- ShortBRED is a pipeline to take a set of protein sequences, reduce them to a set of unique identifying strings ("markers"), and then sear…☆31Updated 9 months ago
- Universal and efficient structure-based core gene phylogeny with Foldseek and ProstT5☆77Updated 4 months ago
- scripts for predicting natural product activity from biosynthetic gene cluster sequences☆24Updated last month
- Detection of incorrectly labeled sequences across kingdoms☆85Updated 3 years ago
- Python bindings for the TaxonKit library☆40Updated 4 months ago
- Code and manual of the endoR R-package (Ruaud et al, in preparation).☆12Updated 2 years ago
- Bacterial Annotation by Learned Representation of Genes☆58Updated 4 years ago