petercim / ClusterFinderLinks
Predicting biosynthetic gene clusters in genomes
☆38Updated 11 years ago
Alternatives and similar repositories for ClusterFinder
Users that are interested in ClusterFinder are comparing it to the libraries listed below
Sorting:
- Bacterial Annotation by Learned Representation of Genes☆58Updated 4 years ago
- Python bindings for the TaxonKit library☆40Updated 3 months ago
- DeepSig - Predictor of signal peptides in proteins based on deep learning☆26Updated 2 years ago
- Protein Alignment and Detection Interface☆60Updated last year
- Toolkit for establishing, updating, and validating GTDB species clusters☆20Updated 3 months ago
- ☆31Updated 3 years ago
- BiG-MEx implementation as Docker images and R packages☆13Updated 3 years ago
- A metagenomic strategy for harnessing the chemical repertoire of the human microbiome☆33Updated 3 months ago
- Computational workflows for metagenomics tasks, by the Bhatt lab☆47Updated 2 years ago
- Reference Phylogeny for Bacterial and Archaeal Genomes☆24Updated 2 months ago
- A snakemake workflow for metagenomic projects☆14Updated 2 years ago
- ☆29Updated last year
- 🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations☆35Updated last year
- Improved Inference of Ortholog Groups using Hidden Markov Models☆37Updated 3 weeks ago
- SMBGC Annotation using Neural Networks Trained on Interpro Signatures☆28Updated 6 months ago
- VIRULIGN: fast codon-correct alignment and annotation of viral genomes☆35Updated 4 years ago
- ☆27Updated 5 years ago
- TreeGrafter is a new software tool for annotating uncharacterized protein sequences, using annotated phylogenetic trees.☆12Updated 2 months ago
- Visualization of the pan-genome output by panX☆64Updated 3 months ago
- Hybridization probe design for targeted genomic sequencing of diverse and hypervariable viral taxa☆25Updated 2 years ago
- Compute strain abundance in a defined microbial community☆10Updated 2 years ago
- OPAL: Open-community Profiling Assessment tooL☆29Updated 8 months ago
- Automatically exported from code.google.com/p/prank-msa☆28Updated 6 months ago
- Workflow to rapidly quantify taxa from all domains of life, directly from short-read human gut metagenomes☆64Updated last week
- Influenza genome analysis Nextflow workflow☆28Updated 3 weeks ago
- Find Unique genomic Regions☆30Updated 3 weeks ago
- Metagenome analysis using the Kraken software suite☆35Updated 3 years ago
- SHOOT.bio - the phylogenetic search engine☆25Updated 2 years ago
- PARTIE is a program to partition sequence read archive (SRA) metagenomics data into amplicon and shotgun data sets. The user-supplied ann…☆25Updated 2 years ago
- ANNOgesic - A Swiss army knife for the RNA-Seq based annotation of bacterial/archaeal genomes☆31Updated last year