petercim / ClusterFinderLinks
Predicting biosynthetic gene clusters in genomes
☆37Updated 11 years ago
Alternatives and similar repositories for ClusterFinder
Users that are interested in ClusterFinder are comparing it to the libraries listed below
Sorting:
- Python bindings for the TaxonKit library☆41Updated last month
- DeepSig - Predictor of signal peptides in proteins based on deep learning☆26Updated 2 years ago
- ☆31Updated 3 years ago
- Reference Phylogeny for Bacterial and Archaeal Genomes☆25Updated 2 years ago
- SMBGC Annotation using Neural Networks Trained on Interpro Signatures☆27Updated 2 months ago
- 🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations☆32Updated last year
- PanGenomePipeline☆16Updated last year
- Convert genbank files to a swath of other formats☆18Updated last year
- Hybridization probe design for targeted genomic sequencing of diverse and hypervariable viral taxa☆24Updated 2 years ago
- Find Unique genomic Regions☆30Updated 3 months ago
- Bacterial Annotation by Learned Representation of Genes☆55Updated 4 years ago
- A metagenomic strategy for harnessing the chemical repertoire of the human microbiome☆33Updated last week
- Tool package to perform in-silico CRISPR analysis and assessment☆28Updated last year
- a Contig Alignment Tool for Pairwise Assembly Comparison☆13Updated 5 years ago
- BiG-MEx implementation as Docker images and R packages☆13Updated 3 years ago
- TreeGrafter is a new software tool for annotating uncharacterized protein sequences, using annotated phylogenetic trees.☆11Updated 4 years ago
- The software involved in the MetaPhase project, as described in G3 (http://dx.doi.org/10.1534/g3.114.011825)☆17Updated 6 years ago
- VIRULIGN: fast codon-correct alignment and annotation of viral genomes☆35Updated 4 years ago
- PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…☆31Updated 3 years ago
- Parse GFF3 into Pandas dataframes☆27Updated last year
- Python package for common tasks in bioinformatic.☆13Updated last year
- ☆30Updated 6 months ago
- Inverted Repeats Finder: a program to analyze DNA and RNA sequences☆18Updated 4 months ago
- CAMITAX: Taxon labels for microbial genomes☆30Updated last year
- Python3 module for running MUMmer and reading the output☆33Updated 3 months ago
- A Python package for discovery, annotation, and analysis of gene clusters in genomics or metagenomics data sets.☆21Updated 3 years ago
- GO FEAT: a rapid web-based functional annotation tool for genomic and transcriptomic data☆17Updated last year
- Toolkit for establishing, updating, and validating GTDB species clusters☆21Updated 2 weeks ago
- Snakemake workflow for the analysis of biosynthetic gene clusters across large collections of genomes (pangenomes)☆42Updated 6 months ago
- Trimming tool for Oxford Nanopore sequence data☆21Updated 4 years ago