Deep learning-based language model for glycan sequences
☆17Jan 17, 2020Updated 6 years ago
Alternatives and similar repositories for sweettalk
Users that are interested in sweettalk are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆13Jul 23, 2020Updated 5 years ago
- protein utilities in Rust☆32Nov 9, 2025Updated 5 months ago
- Repository for Deep Learning Models for Mass Spectrometry written in Rust☆16Mar 16, 2026Updated last month
- ☆10Feb 4, 2025Updated last year
- Package for processing and analyzing glycans and their role in biology.☆88Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Cython bindings and Python interface to MUSCLE v5, a highly efficient and accurate multiple sequence alignment software.☆24Mar 7, 2026Updated last month
- Deep learning model to predict interactions between proteins and glycans [LEGACY; use glycowork implementation]☆14Aug 16, 2021Updated 4 years ago
- Minhash Index Extended to Knead Kmer Intersection☆11Mar 18, 2020Updated 6 years ago
- Repository for "Nearest neighbor search on embeddings rapidly identifies distant protein relations"☆13Apr 2, 2023Updated 3 years ago
- ☆32Jan 27, 2026Updated 2 months ago
- Glycan Analysis and Glycoinformatics Library for Python☆37May 22, 2025Updated 10 months ago
- Mechanical Turk on your own machine for chemical literature annotation☆13Feb 17, 2022Updated 4 years ago
- A Python interface to gb-io, a fast GenBank parser written in Rust.☆24Updated this week
- Framework for the rapid modeling glycans and glycoproteins.☆32Sep 29, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Python module for parsing, writing, aligning, and manipulating glycan structrures☆10Feb 27, 2026Updated last month
- Helpers for Accessing and Querying Amazon Athena using R, Including a lightweight RJDBC shim☆15Feb 26, 2019Updated 7 years ago
- Build and deploy cross platform bioinformatic utilities with Rust.☆19Apr 1, 2025Updated last year
- ☆20Aug 18, 2020Updated 5 years ago
- Cython bindings and Python interface to FastANI, a method for fast whole-genome similarity estimation.☆24Mar 7, 2026Updated last month
- SWift and Optimized Recognition of protein Domains☆29Apr 6, 2026Updated last week
- BiG-MEx implementation as Docker images and R packages☆13Feb 9, 2022Updated 4 years ago
- Graphormer Based Protein Sequence Design☆26Feb 2, 2024Updated 2 years ago
- Bioinformatic Tools for study Evolution of metabolic diversity☆41Feb 27, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Annotation of Metabolite Origin via Networks: A tool for predicting putative metabolite origins for microbes or between microbes and host…☆26Jan 15, 2026Updated 3 months ago
- Phylogenetic Clustering by Linear Integer Programming (PhyCLIP)☆19Oct 27, 2020Updated 5 years ago
- A Better Sequencing Simulator for Metagenomics☆20May 8, 2020Updated 5 years ago
- A lightweight platform-accelerated library for biological motif scanning using position weight matrices.☆62Mar 25, 2026Updated 3 weeks ago
- Regex alternative syntax. Make regex readable.☆10Mar 14, 2018Updated 8 years ago
- A fast, alignment-free method for estimating sequence conservation using protein sequence embedding☆20Feb 6, 2023Updated 3 years ago
- R integration for edlib, a C/C++ library for pairwise sequence alignment using edit distance (Levenshtein distance).☆11Jul 20, 2025Updated 8 months ago
- NRPSpredictor2 is a program to predict the specificity of bacterial and fungal adenylation domains.☆11Oct 7, 2019Updated 6 years ago
- Deep learning multi-label classifier of non-coding DNA sequences☆11Mar 3, 2020Updated 6 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- CLI tool for finding gene clusters in many genomes and placing them in discrete groups based on gene content similarity.☆19Nov 6, 2024Updated last year
- For bluntifying overlapped GFAs☆13Jul 26, 2024Updated last year
- Data Processing Kitchen Sink for proteomics data☆13Apr 10, 2026Updated last week
- C++ lossless and lossy mass spectrometry compression☆15Sep 16, 2021Updated 4 years ago
- Data science tools from Moz☆23Jan 11, 2017Updated 9 years ago
- Compares pangenome graphs by calculating the segmentation distance between two GFA (Graphical Fragment Assembly) files.☆13Oct 1, 2025Updated 6 months ago
- CannonDB is a lightweight but powerful key-value database created for human beings.☆13Dec 17, 2018Updated 7 years ago