BTheDragonMaster / RAIChULinks
Reaction Analysis through Imaging of Chemical Units
☆16Updated 2 months ago
Alternatives and similar repositories for RAIChU
Users that are interested in RAIChU are comparing it to the libraries listed below
Sorting:
- Fast protein domain structure embedding+search tool☆27Updated 4 months ago
- The aim of this repository is to provide simple tools to help those working with ColabFold BATCH both for pre and post-processing steps.☆17Updated 2 years ago
- Python framework for doing ancestral sequence reconstruction☆44Updated last year
- A machine learning model for the prediction of optimal growth temperature of microorganisms and enzyme catalytic optima☆65Updated 5 years ago
- DeepECtransformer☆29Updated 2 years ago
- Observed substitution counts of SARS-CoV-2 compared to those expected under the mutation rates☆21Updated last year
- A CLI for pairwise alignment of sequences, using both normal and mass based alignment.☆15Updated 2 months ago
- Protein structure alignment and search algorithm☆79Updated 2 weeks ago
- ProtSpace is program that helps in visualizing and investigating our protein embedding space.☆45Updated 2 weeks ago
- RetroPath2.0 to pathways☆18Updated 2 weeks ago
- ☆12Updated last year
- A predictor of enzyme optimal temperature☆11Updated 10 months ago
- Protein discovery tool for mining in the Alphafold database based on the position of few amino acids.☆29Updated 3 weeks ago
- Calculates pairwise sequence identity, similarity and normalized similarity score of proteins in a multiple sequence alignment.☆18Updated 2 years ago
- Python module for parsing, writing, aligning, and manipulating glycan structrures☆10Updated last week
- Benchmarking scripts for Gaia☆13Updated 10 months ago
- Python code to color a PDB structure based on parameters from a multiple sequence alignment☆33Updated last month
- Detection of remote homology by comparison of protein language model representations☆61Updated last year
- Ancestral Sequence Reconstruction in Python☆14Updated 6 years ago
- Maximum likelihood structural phylogenetics by including Foldseek 3Di characters. Supporting Information for Puente-Lelievre et al. 2023n…☆24Updated 9 months ago
- ☆20Updated 2 years ago
- ☆23Updated 2 years ago
- PLMAlign utilizes per-residue embeddings as input to obtain specific alignments and more refined similarity☆20Updated 5 months ago
- Conservation analysis of homologous proteins with Python☆13Updated 4 years ago
- GTalign, high-performance protein structure alignment, superposition and search☆54Updated 5 months ago
- Evolutionary conservation estimation of residues or nucleotides☆57Updated 3 years ago
- A python framework for microbial natural products data mining by integrating genomics and metabolomics data☆22Updated 2 weeks ago
- Transmembrane proteins predicted through Language Model embeddings☆44Updated 6 months ago
- MS2Query - machine learning assisted library querying of MS/MS spectra☆54Updated 3 months ago
- Protein Sequence Annotation with Language Models☆27Updated 2 weeks ago