nf-core / circrna
circRNA quantification, differential expression analysis and miRNA target prediction of RNA-Seq data
☆43Updated this week
Related projects: ⓘ
- optimization of ribosome P-site positioning in ribosome profiling data☆43Updated 8 months ago
- ☆49Updated 3 years ago
- Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq☆56Updated last week
- REDItools are python scripts to investigate RNA editing at genomic scale.☆59Updated 3 years ago
- Pipeline for Somatic Variant Calling with WES and WGS data☆20Updated 4 months ago
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆49Updated last year
- Full-length transcriptome splicing and mutation analysis☆70Updated 2 months ago
- A package for quantifying transposable elements at a locus level for RNAseq datasets.☆23Updated 3 weeks ago
- A tool for the calculation of RNA-editing index for RNA seq data☆35Updated 7 months ago
- Tutorial Website☆51Updated 3 years ago
- My youtube programming scripts☆33Updated last week
- Benchmarking of aligners and variant callers for Whole Exome Sequencing data☆19Updated 5 years ago
- Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools☆66Updated 3 years ago
- A Perl/R pipeline for plotting metagenes☆34Updated 3 years ago
- B-cell and T-cell Adaptive Immune Receptor Repertoire (AIRR) sequencing analysis pipeline using the Immcantation framework☆52Updated last month
- trackplot is a tool for visualizing various next-generation sequencing (NGS) data, including DNA-seq, RNA-seq, single-cell RNA-seq and fu…