BioinfoUNIBA / QEditLinks
RNA editing quantification in deep transcriptome data
☆15Updated 2 years ago
Alternatives and similar repositories for QEdit
Users that are interested in QEdit are comparing it to the libraries listed below
Sorting:
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆39Updated 3 years ago
- ☆58Updated 3 years ago
- Tutorial Website☆59Updated 4 years ago
- A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.☆35Updated 3 years ago
- Tools for analyzing DNA methylation data☆42Updated last week
- GIREMI is a method that can identify RNA editing sites using one RNA-seq data set without requiring genome sequence data.☆44Updated 8 years ago
- Detecting intron retention from RNA-Seq experiments☆55Updated 11 months ago
- tools to find circRNAs in RNA-seq data☆43Updated 7 years ago
- Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools☆77Updated 3 years ago
- Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data☆28Updated 2 years ago
- ☆15Updated 2 years ago
- A list of alternative splicing analysis resources☆44Updated 3 months ago
- A Perl/R pipeline for plotting metagenes☆37Updated 3 years ago
- Scripts to import your FeatureCounts output into DEXSeq☆33Updated 6 years ago
- Snakemake based pipeline for RNA-Seq analysis☆31Updated 6 years ago
- A toolset for profiling alternative splicing events in RNA-Seq data.☆81Updated 5 months ago
- perl cworld module and collection of utility/analysis scripts for C data (3C, 4C, 5C, Hi-C)☆65Updated 6 years ago
- ☆69Updated 2 years ago
- Enhanced version of the FastQTL QTL mapper☆67Updated 2 years ago
- BS-Seeker3: An Ultra-fast, Versatile Pipeline for Mapping Bisulfite-treated Reads.☆27Updated 6 years ago
- A pipeline for differential expression and differential alternative splicing analysis☆67Updated last year
- An R interface to the MEME Suite☆50Updated last month
- an R/Shiny application for interactive creation of non-circular plots of whole genomes☆45Updated 2 months ago
- ☆23Updated 4 years ago
- ☆13Updated 7 years ago
- ☆30Updated 6 years ago
- snakemake workflow for post-processing scATACseq data☆22Updated 5 years ago
- Demultiplexes a fastq.☆45Updated 4 years ago
- CLIP-seq Analysis of Multi-mapped reads☆31Updated 3 years ago
- SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, …☆46Updated 3 months ago