ZhaozzReal / IPAFinderLinks
Systematic analyses of intronic polyadenylation from standard RNAseq data
☆14Updated last year
Alternatives and similar repositories for IPAFinder
Users that are interested in IPAFinder are comparing it to the libraries listed below
Sorting:
- ☆18Updated 2 years ago
- ☆18Updated 5 years ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆32Updated 8 months ago
- Analysis pipeline for our circSC manuscript☆14Updated 3 years ago
- ☆12Updated 6 years ago
- Snakemake pipeline for plate scATAC-seq processing☆26Updated 2 years ago
- Suite of analysis tools for spatial total RNA-sequencing☆12Updated 2 years ago
- A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.☆23Updated 6 years ago
- Model-based analysis of APA using 3' end-linked reads☆11Updated 4 years ago
- Tools for detecting alternative splicing events and genotype in single-cell gene expression data.☆15Updated last year
- https://molecular-neurogenetics.github.io/truster/☆11Updated 5 months ago
- Dynamic Analysis of Alternative Polyadenylation from single-cell RNA-seq (scDaPars)☆18Updated 4 years ago
- Code and data from Koche et al. Extrachromosomal circular DNA drives oncogenic genome remodeling in neuroblastoma (2020)☆15Updated 5 years ago
- ☆39Updated 3 months ago
- ☆26Updated 2 years ago
- Scripts used for the ACT paper☆12Updated 4 years ago
- West Coast Dream Team Whole Genome Bisulfite Sequencing☆15Updated last month
- Notebooks for generating figures in "Progressive Plasticity During Colorectal Cancer Metastasis"☆16Updated last year
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆25Updated 3 years ago
- ☆20Updated 2 years ago
- R package of CSOmap(developing☆13Updated 3 years ago
- ☆52Updated last year
- Code accompanying Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes☆44Updated 4 years ago
- ☆12Updated 4 years ago
- Spatial Computational Inference of MEtastatic Timing (SCIMET)☆14Updated 6 years ago
- ☆12Updated 2 years ago
- Pipeline to analyze long-read mRNA isoforms and ORF products sequenced in breast cancer using PacBio Single-Molecule technology.☆16Updated 3 years ago
- ScisorWiz: Differential Isoform Visualizer for Long-Read RNA Sequencing Data☆18Updated last year
- Advanced steps of the OSCA book☆14Updated last month
- ☆16Updated last month