Alternatives and similar repositories for NLncCirSmk

Users that are interested in NLncCirSmk are comparing it to the libraries listed below

• YaoLab-Bioinfo / shinyChromosome
  an R/Shiny application for interactive creation of non-circular plots of whole genomes
  ☆45Updated 7 months ago
• camoragaq / BrumiR
  BrumiR: A toolkit for de novo discovery of microRNAs from sRNA-seq data.
  ☆12Updated 3 years ago
• junjunlab / BioSeqUtils
  Extract Sequence from Genome According to Annotation File
  ☆38Updated 8 months ago
• chaolinzhanglab / ctk
  CLIP Tool Kit (CTK)
  ☆21Updated last year
• a-velt / Mfuzz_RNAseq
  A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.
  ☆23Updated 6 years ago
• nongxinshengxin / RNAdiffAPP
  ☆17Updated last year
• YaoLab-Bioinfo / ECOGEMS
  Efficient compression and retrieve of genotype data with integer sparse matrices
  ☆16Updated 8 months ago
• ShawnWx2019 / MetMiner
  MetMiner: A user-friendly pipeline for large-scale plant metabolomics data analysis
  ☆17Updated last year
• Xinglab / lr2rmats
  Long read to rMATS
  ☆32Updated 2 years ago
• hangelwen / miR-PREFeR
  microRNA PREdiction From small RNA-seq data
  ☆30Updated 7 years ago
• dxsbiocc / ggideogram
  ggideogram is a ggplot2 extension package for drawing chromosome diagrams
  ☆17Updated last year
• MarWoes / wg-blimp
  wg-blimp: an end-to-end analysis pipeline for whole genome bisulfite sequencing data
  ☆28Updated 3 years ago
• jameslz / fastx-utils
  fastx-utils using klib
  ☆20Updated 5 years ago
• Searchlight2 / Searchlight2
  Rapid analysis and visualisation for bulk RNA-seq, psuedo-bulk RNA-seq, GeoMx and Proteomic datasets.
  ☆30Updated last year
• RitataLU / ATACgraph
  ☆15Updated 2 years ago
• menghaowei / ngstools
  My own tools code for NGS data analysis (Next Generation Sequencing)
  ☆30Updated 6 years ago
• sartorlab / methylSig
  R package for DNA methylation analysis
  ☆19Updated last year
• MengjunWu / TCseq
  An R package for time course sequencing data analysis
  ☆20Updated 2 years ago
• HuaZou / bioinformatics_pipeline
  Bioinformatics Pipeline
  ☆12Updated 3 years ago
• guokai8 / bioAnno
  Build Annotation package by using information from KEGG, NCBI, Ensembl
  ☆15Updated 2 years ago
• jasonwong-lab / gghic
  gghic makes visualization of Hi-C/-like data easily in R
  ☆18Updated this week
• jkimlab / msPIPE
  ☆20Updated 2 years ago
• jlab-code / MethylStar
  A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.
  ☆37Updated 4 years ago
• junjunlab / ggChIPvis
  Profile and Heatmap Visualization by Using ggplot2 and grid
  ☆11Updated 2 years ago
• sanjaynagi / rna-seq-pop
  Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data
  ☆18Updated 8 months ago
• Aufiero / circRNAprofiler
  ☆11Updated 7 months ago
• flemingtonlab / SpliceTools
  ☆17Updated last year
• OmicsAcademy / bioinf2019
  ☆29Updated 6 years ago
• twlab / TEProf2Paper
  TEProf2 Pipeline used to find promoters and predict protein sequences from RNA-sequencing data
  ☆27Updated 2 years ago
• xuzhougeng / RNA-seq-downstream-analysis
  Arabidopsis RNA_-seq downstream analysis shiny app
  ☆30Updated 6 years ago