KechrisLab / multiMiR
Development repository for the multiMiR database's R API
☆20Updated 8 months ago
Alternatives and similar repositories for multiMiR:
Users that are interested in multiMiR are comparing it to the libraries listed below
- A web-based application to perform Gene Set Enrichment Analysis (GSEA) using clusterProfiler and shiny R libraries☆18Updated 5 years ago
- Identify and correct invalid gene symbols☆58Updated 5 months ago
- ☆40Updated 7 years ago
- R package for testing and visualizing gene list overlaps☆18Updated 8 years ago
- R package wrapping bedtools☆40Updated last month
- Software Package for Transcription Factor Binding Site (TFBS) Analysis☆28Updated last month
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment☆20Updated last year
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆27Updated 4 years ago
- Filtering of PDX samples for mouse derived reads☆27Updated 2 years ago
- Snakemake pipeline for benchmarking cell-type deconvolution methods and deconvolving real bulk RNA-seq data with the use of scRNA-seq dat…☆15Updated last week
- workshop website on readthedocs☆19Updated last week
- GLASS consortium☆13Updated 2 years ago
- Quantifying copy number signatures from absolute copy number profiles☆24Updated last month
- ☆38Updated 2 years ago
- Software for preprocessing, filtering, alignment, and reporting of smallRNA-seq datasets☆23Updated 2 years ago
- Analysis and Visualization of Multiple Gene Set Enrichments☆25Updated this week
- Detecting Aberrant Splicing Events from RNA-sequencing data☆16Updated 4 months ago
- documentation for trackViewer☆29Updated 5 years ago
- R statistical toolbox for metabolomics☆20Updated 2 weeks ago
- R package for Flexible dot plots☆29Updated 2 years ago
- Machine learning algorithm to predict biological pathway relationships based on functional genomics networks☆20Updated 6 years ago
- Molecular Signatures Database (MSigDB) in a data frame☆27Updated 7 months ago
- R package to visualize scRNA sequencing data.☆20Updated 3 years ago
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated 2 years ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆18Updated 3 years ago
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆31Updated 3 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated last week
- An R package to analyze single-cell V(D)J data☆25Updated last year
- VennDetail: a bioconductor package for VennDiagram visualization and details extraction☆29Updated 3 weeks ago
- 🧬 Gene analysis toolkit based on R☆56Updated 4 months ago