Development repository for the multiMiR database's R API
☆24Aug 28, 2024Updated last year
Alternatives and similar repositories for multiMiR
Users that are interested in multiMiR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- simpler single cell RNAseq data Visualization☆12Feb 28, 2025Updated last year
- ☆11Updated this week
- Reactome Pathway Analysis☆45Dec 23, 2025Updated 4 months ago
- Snakemake workflow for somatic mutation detection without matched normal samples☆13Mar 4, 2023Updated 3 years ago
- omics data analysis using clusterProfiler ;)☆15Jun 6, 2024Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A workflow to analyse sequence mutations in CRISPR-CAS9 targeted amplicon sequencing data☆12Feb 1, 2024Updated 2 years ago
- R client for the REACTOME Analysis Service for comparative multi-omics gene set analysis☆33Mar 4, 2026Updated last month
- Single-cell analytic toolbox that offers modular workflows for multi-level cellular annotation and user-friendly analysis reports☆11Mar 31, 2026Updated 3 weeks ago
- A networks analysis pipeline for RNASeq time series data☆14Oct 16, 2020Updated 5 years ago
- Code for "Single cell transcriptomes from human kidneys reveal the cellular identity of renal tumours"☆28Jun 5, 2018Updated 7 years ago
- a parallel R package for detecting copy-number alterations from short sequencing reads☆24Jul 15, 2021Updated 4 years ago
- ☆15Oct 7, 2025Updated 6 months ago
- 2019 single cell RNA sequencing Workshop @ UCD AND UCSF☆17Nov 25, 2019Updated 6 years ago
- ☆10Oct 17, 2019Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆13Mar 17, 2026Updated last month
- sharing interactive single cell gene expression visualizations from Seurat☆13May 18, 2023Updated 2 years ago
- R package developed for single-cell RNA-seq analysis. It was designed using the Seurat framework, and offers existing and novel single-ce…☆34Nov 28, 2025Updated 5 months ago
- circRNA quantification, differential expression analysis and miRNA target prediction of RNA-Seq data☆58Mar 30, 2026Updated 3 weeks ago
- 基于rstudio、code-server、jupyter-lab的dockerfile，用于快速搭建数据分析环境。☆57Nov 14, 2022Updated 3 years ago
- A fast and programmatic MELODI☆17Apr 16, 2024Updated 2 years ago
- ST Pipeline contains the tools and scripts needed to process and analyze the raw files generated with the Spatial Transcriptomics method …☆86Apr 13, 2021Updated 5 years ago
- A Docker workflow to work reproducibly with papaja in RStudio☆10Nov 16, 2021Updated 4 years ago
- Code to run OncoSig Analyses☆18Sep 30, 2020Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Murine version of MCP-counter, a tool to estimate the immune and stromal composition of heterogeneous tissue, from transcriptomic data☆12Jun 30, 2022Updated 3 years ago
- GDCRNATools: an R/Bioconductor package for integrative analysis of lncRNA, miRNA and mRNA data in GDC☆69Sep 10, 2023Updated 2 years ago
- RNAseq analysis pipeline☆27Apr 1, 2026Updated 3 weeks ago
- Network construction Algorithm☆22Sep 5, 2024Updated last year
- Docker for MetaboAnalyst 4.0☆25Nov 16, 2020Updated 5 years ago
- Crossmapped phenotype ontologies for the oncology domain☆14Mar 29, 2026Updated last month
- R code for Combining gene mutation with gene expression data improves outcome prediction in myelodysplastic syndromes☆13Mar 23, 2016Updated 10 years ago
- A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.☆23Apr 16, 2019Updated 7 years ago
- Somatic variant identification from unpaired samples☆15Jan 31, 2017Updated 9 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- public production version of sequin to share with the public☆11Jan 6, 2025Updated last year
- Somatic workflow for Kids-First☆15Apr 16, 2026Updated last week
- MERFISH decoding software☆26Aug 16, 2025Updated 8 months ago
- Use batch balanced KNN (BBKNN) in R☆13Sep 9, 2025Updated 7 months ago
- R functions for automation of biomarker discovery based on processing downstream of large LC-MS datasets from any peak picking software☆10May 17, 2017Updated 8 years ago
- ☆14Aug 31, 2016Updated 9 years ago
- Multi-omics data normalisation, model fitting and visualisation.☆27Apr 6, 2023Updated 3 years ago