bioinfo-biols / CIRIquantLinks
circular RNA quantification tools
☆31Updated last year
Alternatives and similar repositories for CIRIquant
Users that are interested in CIRIquant are comparing it to the libraries listed below
Sorting:
- A list of alternative splicing analysis resources☆46Updated 9 months ago
- Integrative analysis pipeline for pooled CRISPR functional genetic screens☆32Updated last year
- MeRIPseqPipe:An integrated analysis pipeline for MeRIP-seq data based on Nextflow.☆42Updated last year
- documentation for trackViewer☆29Updated 6 years ago
- A pipeline to process m6A-seq data and down stream analysis.☆45Updated 5 years ago
- direct comparison of circular and linear RNA expression☆23Updated 4 years ago
- Transcriptomics Visualization R package.☆74Updated 8 months ago
- Convert Counts to Fragments per Kilobase of Transcript per Million (FPKM)☆63Updated 4 years ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆24Updated 2 years ago
- Demultiplexes a fastq.☆48Updated 5 years ago
- Create KEGG.db Package☆64Updated 2 years ago
- optimization of ribosome P-site positioning in ribosome profiling data☆55Updated 10 months ago
- Bayesian network plot for the enrichment analysis results☆66Updated last year
- Code and analysis pipeline for Smart-seq3 (Hagemann-Jensen et al. 2020).☆56Updated 4 years ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆42Updated 4 years ago
- Integrative pathway enrichment analysis of multivariate omics data☆117Updated 5 months ago
- A comprehensive, accurate and efficient solution for analysis of large scale base-resolution DNA methylation data☆17Updated 4 years ago
- Multiscale embedded gene co-expression network analysis☆58Updated last year
- ☆25Updated 3 years ago
- From RNA-seq raw reads to enriched pathways by DEGs☆33Updated last year
- A detailed guide to analise and integrate small-RNASeq and RNASeq samples using miARma-Seq☆11Updated 6 years ago
- a versatile and flexible pipeline for analysing different variants of ChIA-PET data☆35Updated last year
- Microbial analysis in TCGA data☆94Updated last year
- Scripts for paper entitled "Limits in the detection of m6A changes using MeRIP/m6A-seq☆51Updated 5 years ago
- Small non-coding RNA annotation Pipeline Optimized for rRNA- and tRNA-Derived Small RNAs☆53Updated 5 months ago
- A Perl/R pipeline for plotting metagenes☆37Updated 4 years ago
- Tutorial Website☆60Updated 4 years ago
- tools to find circRNAs in RNA-seq data☆44Updated 8 years ago
- A Python3-base pipeline for translated circular RNA(circRNA) identification☆19Updated 2 months ago
- This RNAseq data analysis tutorial is created for educational purpose☆32Updated 2 months ago