Xinglab / isoCirc
isoCirc
☆10Updated 11 months ago
Related projects ⓘ
Alternatives and complementary repositories for isoCirc
- ☆10Updated 4 years ago
- The Isoforms from Single-Cell; Long-read Expression Suite☆18Updated 2 months ago
- ☆23Updated 3 years ago
- ScisorWiz: Differential Isoform Visualizer for Long-Read RNA Sequencing Data☆15Updated 6 months ago
- ORF Quantification pipeline for Alternative Splicing☆15Updated 3 years ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆20Updated last year
- ☆15Updated 2 years ago
- Nanopore 3' end-capture sequencing (Begik et al., bioRxiv 2021)☆12Updated last year
- Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data☆26Updated last year
- nanoNOMe (Nucleosome Occupancy and Methylome nanopore sequencing) Analysis☆17Updated last year
- ☆18Updated 3 months ago
- Isoform co-usage networks from single-cell RNA-seq data☆15Updated 8 months ago
- Penguin: A Tool for Predicting Pseudouridine Sites in Direct RNA Nanopore Sequencing Data☆12Updated 2 years ago
- ☆17Updated 6 months ago
- Two pass alignment for long reads☆20Updated 3 years ago
- Reconstructs complex variation using Bionano optical mapping data and breakpoint graph data☆16Updated 11 months ago
- ☆20Updated 4 years ago
- TIMEOR: Trajectory Inference and Mechanism Exploration with Omics Data in R☆17Updated 2 years ago
- software for analysis of chromatin feature occupancy profiles from high-throughput sequencing data☆15Updated 4 years ago
- Predicting TF sequence-specificity similarity with weighted alignments☆12Updated 5 years ago
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seq☆20Updated last year
- A script to make downloading of SRA/GEO data easier☆30Updated last year
- Long read to rMATS☆31Updated last year
- R package: TopDom - An efficient and Deterministic Method for identifying Topological Domains in Genomes☆20Updated last year
- ☆11Updated 2 years ago
- ☆23Updated 2 months ago
- Scripts used in the analysis of C elegans dRNAseq data☆14Updated 7 months ago
- Summarise and plot data from long-read ONT (direct RNA/cDNA) BAM files☆13Updated 7 months ago
- Annotation and segmentation of MAS-seq data