Xinglab / isoCircLinks
isoCirc
☆10Updated last year
Alternatives and similar repositories for isoCirc
Users that are interested in isoCirc are comparing it to the libraries listed below
Sorting:
- ☆10Updated 4 years ago
- nanoNOMe (Nucleosome Occupancy and Methylome nanopore sequencing) Analysis☆19Updated 2 years ago
- Long read to rMATS☆32Updated 2 years ago
- ☆36Updated 2 years ago
- The analysis pipeline for FLEP-seq☆14Updated 2 years ago
- R package: TopDom - An efficient and Deterministic Method for identifying Topological Domains in Genomes☆21Updated 2 years ago
- ☆32Updated 9 months ago
- ☆13Updated 2 years ago
- Reconstructs complex variation using Bionano optical mapping data and breakpoint graph data☆18Updated last year
- Nanopore 3' end-capture sequencing (Begik et al., bioRxiv 2021)☆13Updated 2 months ago
- Long-read Isoform Quantification and Analysis☆38Updated 5 months ago
- ☆19Updated 2 years ago
- SpliceWiz is an R package for exploring differential alternative splicing events in splice-aware alignment BAM files.☆21Updated 6 months ago
- TIMEOR: Trajectory Inference and Mechanism Exploration with Omics Data in R☆17Updated 3 years ago
- Two pass alignment for long reads☆22Updated 4 years ago
- Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data☆28Updated 2 years ago
- ☆22Updated 2 years ago
- Summarise and plot data from long-read ONT (direct RNA/cDNA) BAM files☆14Updated last year
- Predicting TF sequence-specificity similarity with weighted alignments☆13Updated 5 years ago
- ☆23Updated 4 years ago
- First version of PORE-cupine. Detecting SHAPE modification using direct RNA sequencing☆14Updated 2 years ago
- software for analysis of chromatin feature occupancy profiles from high-throughput sequencing data☆17Updated 5 years ago
- Alternative polyadenylation detection from diverse data sources such as 3'-seq, long-read and short-reads.☆31Updated last year
- Annotation and segmentation of MAS-seq data☆20Updated 2 years ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆23Updated 2 years ago
- Scripts used in the analysis of C elegans dRNAseq data☆14Updated last year
- A Library to Explore Chromatin Interaction Patterns for Topologically Associating Domains☆44Updated 3 years ago
- Versatile FASTA/FASTQ demultiplexer.☆33Updated last year
- Splits fastq files evenly☆22Updated 5 years ago
- HiCnv is used to call copy number variations and breakpoints from Hi-C data☆21Updated last year