Xinglab / isoCirc
isoCirc
☆10Updated last year
Alternatives and similar repositories for isoCirc:
Users that are interested in isoCirc are comparing it to the libraries listed below
- ☆10Updated 4 years ago
- Predicting TF sequence-specificity similarity with weighted alignments☆13Updated 5 years ago
- Analysis pipeline for our circSC manuscript☆13Updated 2 years ago
- Long read to rMATS☆31Updated 2 years ago
- Model-based analysis of APA using 3' end-linked reads☆9Updated 3 years ago
- ☆23Updated 3 years ago
- Two pass alignment for long reads☆22Updated 4 years ago
- ☆28Updated 4 months ago
- Isoform co-usage networks from single-cell RNA-seq data☆16Updated last year
- ScisorWiz: Differential Isoform Visualizer for Long-Read RNA Sequencing Data☆16Updated last year
- ORF Quantification pipeline for Alternative Splicing☆16Updated 3 years ago
- Transposable Element Finder - Detection of active transposable elements from NGS data☆9Updated last week
- ☆18Updated 2 years ago
- ☆15Updated 2 years ago
- Nanopore 3' end-capture sequencing (Begik et al., bioRxiv 2021)☆12Updated last year
- R package: TopDom - An efficient and Deterministic Method for identifying Topological Domains in Genomes☆21Updated last year
- nanoNOMe (Nucleosome Occupancy and Methylome nanopore sequencing) Analysis☆18Updated 2 years ago
- ☆17Updated 9 months ago
- A script to make downloading of SRA/GEO data easier☆30Updated last year
- SpliceWiz is an R package for exploring differential alternative splicing events in splice-aware alignment BAM files.☆18Updated last month
- Reconstructs complex variation using Bionano optical mapping data and breakpoint graph data☆17Updated last year
- Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data☆27Updated last year
- Penguin: A Tool for Predicting Pseudouridine Sites in Direct RNA Nanopore Sequencing Data☆13Updated 3 years ago
- ☆18Updated last year
- software for analysis of chromatin feature occupancy profiles from high-throughput sequencing data☆17Updated 5 years ago
- Allo: a multi-mapped read rescue strategy for gene regulatory analyses☆24Updated 8 months ago
- ☆12Updated 2 years ago
- Comprehensive and scalable differential splicing analyses☆17Updated last month
- HiCnv is used to call copy number variations and breakpoints from Hi-C data☆21Updated last year
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seq☆22Updated last year