Alternatives and similar repositories for ADEpigenetics:

Users that are interested in ADEpigenetics are comparing it to the libraries listed below

• cole-trapnell-lab / cicero
  ☆12Updated 11 months ago
• wkl1990 / Illumina450K-methylation
  From IDAT to beta.
  ☆25Updated 6 years ago
• haniffalab / Single-cell-RNAseq-data-analysis-bundle
  ☆12Updated 2 years ago
• BIMSBbioinfo / netSmooth
  netSmooth: A Network smoothing based method for Single Cell RNA-seq imputation
  ☆27Updated 8 months ago
• czbiohub-sf / tabula-muris-vignettes
  Examples analyses using the single-cell RNA-seq data from mouse cell atlases
  ☆23Updated 5 years ago
• lhqing / mouse_brain_2020
  Jupyter notebook repository for reproducing analysis in "DNA Methylation Landscape of the Mouse Brain at Single-Cell Resolution"
  ☆12Updated 4 years ago
• liuqivandy / scRNABatchQC
  ☆11Updated 3 years ago
• lutsik / CellTypeInferenceMethods
  A public list of computational methods for cell type inference from genome-scale DNA methylation data
  ☆12Updated 5 years ago
• CamaraLab / TDA-TCGA
  R package for the identification of cancer-associated mutated genes using gene expression and mutation data.
  ☆10Updated 3 years ago
• SchulzLab / EpigenomicsTutorial-ISMB2017
  Repository for the Epigenomics Tutorial hold at ISMB 2017 in Prague
  ☆14Updated 4 years ago
• yanailab / moana
  Moana: Robust cell type classification of single-cell RNA-Seq data
  ☆24Updated 6 years ago
• quon-titative-biology / scAlign
  A deep learning-based tool for alignment and integration of single cell genomic data across multiple datasets, species, conditions, batch…
  ☆35Updated 3 years ago
• biobenkj / compartmap
  Reconstruction of higher order chromatin from scRNA-seq and scATAC-seq
  ☆13Updated last year
• scottgigante / machine-learning-tutorial
  Machine learning tutorial for biologists, designed for Oz Single Cells 2019
  ☆15Updated 5 years ago
• gofflab / developing_mouse_retina_scRNASeq
  10x single cell RNA-seq data from the developing mouse retina
  ☆16Updated 3 years ago
• BaderLab / AgingMouseBrainCCInx
  Predicted cell-cell interactions of the aging mouse brain
  ☆20Updated 5 years ago
• SpatialTranscriptomicsResearch / st_viewer
  A GUI tool for easy and smooth visualisation and analysis of Spatial Transcriptomics datasets
  ☆13Updated 3 years ago
• KChen-lab / SCMER
  Marker Selection by matching manifolds and elastic net
  ☆23Updated 3 months ago
• lkmklsmn / insct
  scRNAseq integration with triplet neural networks
  ☆39Updated 2 years ago
• cozygene / glint
  ☆21Updated 4 years ago
• xzhoulab / DRComparison
  Comparison of dimensionality reduction methods
  ☆30Updated 4 years ago
• ajitjohnson / imsig
  Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours
  ☆26Updated 4 years ago
• Teichlab / cellity
  ☆37Updated 8 years ago
• pachterlab / BYVSTZP_2020
  This repository contains the code for reproducing all the results and figures from the preprint "Isoform specificity in the mouse primary…
  ☆15Updated 3 years ago
• theislab / enrichment_analysis_celltype
  Cell type enrichment analysis using gene signatures and cluster markers
  ☆9Updated 7 years ago
• greenelab / CZI-Latent-Assessment
  Supplement to the report in https://greenelab.github.io/czi-hca-report/
  ☆9Updated 6 years ago
• mruffalo / sc-rna-seq-pipeline
  ☆23Updated 5 years ago
• pmelsted / AM_2024
  Analaysis for the batch correction paper
  ☆9Updated 2 weeks ago
• ccshao / nimfa
  nimfa - A Python Library for Nonnegative Matrix Factorization Techniques
  ☆10Updated 6 years ago
• GregorySchwartz / tooManyCellsR
  An R wrapper for too-many-cells, for clustering single cells and analyzing cell clade relationships with colorful visualizations.
  ☆25Updated 4 years ago