Renders SVG schema of SARS-CoV-2 clade as defined by Nextstrain
☆17Nov 24, 2025Updated 4 months ago
Alternatives and similar repositories for ncov-clades-schema
Users that are interested in ncov-clades-schema are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- SARS-CoV-2 genome data analysis☆10Dec 6, 2025Updated 3 months ago
- SARs-CoV-2 Primer schemes☆16May 14, 2025Updated 10 months ago
- Datasets for https://github.com/nextstrain/nextclade☆44Mar 6, 2026Updated 3 weeks ago
- ☆20Apr 25, 2023Updated 2 years ago
- ☆10Apr 16, 2025Updated 11 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- The R package 'phylosamp' implements novel tools that estimate the probability of transmission between two cases given phylogenetic linka…☆13May 23, 2023Updated 2 years ago
- Consensus sequences for each Pango lineage☆23Jun 27, 2025Updated 9 months ago
- Tools for analyzing and comparing SARS-CoV-2 phylogenies☆10Nov 21, 2020Updated 5 years ago
- 🧬 💻 TOSTADAS → Toolkit for Open Sequence Triage, Annotation and DAtabase Submission☆29Mar 10, 2026Updated 2 weeks ago
- Spriggan is a pipeline used for assembly of bacterial whole genome sequence data and identification of antibiotic resistance genes.☆16Updated this week
- ☆20Apr 2, 2025Updated 11 months ago
- ☆16May 12, 2023Updated 2 years ago
- ☆11Aug 18, 2024Updated last year
- Reproducible workflow for SARS-CoV-2 recombinant sequence detection.☆18May 15, 2023Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Informal summaries of notable SARS-CoV-2 lineages☆111Aug 22, 2025Updated 7 months ago
- Depth-weighted De-Mixing☆129Updated this week
- Prepares a SARS-CoV-2 submission for GISAID, NCBI or ENA. Can read GISAID or NCBI files, or plain fasta+tsv/csv/xls. Finds files in input…☆36May 1, 2022Updated 3 years ago
- Nextstrain build for dengue virus☆13Mar 6, 2026Updated 3 weeks ago
- MIRA: Portable, Interactive Application for High-Quality Influenza, SARS-CoV-2 and RSV Genome Assembly, Annotation, and Curation☆23Mar 18, 2026Updated last week
- app to collapse Pango lineages for reporting☆13Dec 9, 2025Updated 3 months ago
- ☆25Jun 25, 2024Updated last year
- ☆46Jan 16, 2026Updated 2 months ago
- SARS-Cov-2 Recombinant Finder for fasta sequences☆50Jun 22, 2022Updated 3 years ago
- NordVPN Threat Protection Pro™ • AdTake your cybersecurity to the next level. Block phishing, malware, trackers, and ads. Lightweight app that works with all browsers.
- ☆21Feb 12, 2026Updated last month
- Miscellaneous helper tools for epidemiologists☆10Nov 9, 2025Updated 4 months ago
- Projects on COVID-19 topic of genomic sequencing - mostly DataViz☆59Mar 14, 2026Updated 2 weeks ago
- Find Prokaryotic DNA methylase genes in proteins, contigs, or genomes☆11Jan 23, 2026Updated 2 months ago
- UPHL's Reference Free Pipeline☆28Updated this week
- A COVID-19 CoV Genetics (CG) browser to inform therapeutics development☆26Jan 12, 2026Updated 2 months ago
- Nanopore read de-multiplexer☆13Mar 25, 2020Updated 6 years ago
- Summarise nucleotide counts at a set of positions in a BAM file to search for mixtures☆13Apr 5, 2022Updated 3 years ago
- Olivar: towards automated variant aware primer design for multiplex tiled amplicon sequencing of pathogens☆38Jan 22, 2026Updated 2 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- LYVE-SET, a method of using hqSNPs to create a phylogeny, especially for outbreak investigations☆26Aug 26, 2024Updated last year
- DEPRECATED: Use Cenote-Taker 3 instead☆14Jan 19, 2024Updated 2 years ago
- Ultra-rapid detection of viral variants directly from sequencing data☆38Feb 17, 2026Updated last month
- Opinionated viral metagenomics workflow☆12Mar 18, 2026Updated last week
- Repository for useR! 2021 TileDB Tutorial Helper Package☆12Aug 4, 2021Updated 4 years ago
- Store of the trained model for pangolin to access.☆55Oct 4, 2022Updated 3 years ago
- Migrating from SAS to R☆15Feb 23, 2024Updated 2 years ago