neherlab / SARS-CoV-2_variant-reportsLinks
Informal summaries of notable SARS-CoV-2 lineages
☆110Updated 3 months ago
Alternatives and similar repositories for SARS-CoV-2_variant-reports
Users that are interested in SARS-CoV-2_variant-reports are comparing it to the libraries listed below
Sorting:
- ☆11Updated last year
- Repository to propose and discuss lineages☆51Updated last week
- Viral genome alignment, mutation calling, clade assignment, quality checks and phylogenetic placement☆247Updated this week
- Datasets for https://github.com/nextstrain/nextclade☆41Updated this week
- Ultrafast Sample Placement on Existing Trees☆135Updated 2 weeks ago
- Repository for storing latest model, protobuf, designation hash and alias files for pangolin assignments☆32Updated 2 weeks ago
- ☆50Updated 3 years ago
- R package for studying phylogenetically-informed movements (Dellicour et al. 2016, Bioinformatics; Dellicour et al., submitted)☆37Updated 2 weeks ago
- Depth-weighted De-Mixing☆125Updated this week
- Nextstrain build for mpox virus☆50Updated last week
- Store of the trained model for pangolin to access.☆55Updated 3 years ago
- Software package for assigning SARS-CoV-2 genome sequences to global lineages.☆443Updated 2 weeks ago
- SARS-Cov-2 Recombinant Finder for fasta sequences