jbloomlab / SARS2_RBD_Ab_escape_mapsLinks
☆16Updated 2 years ago
Alternatives and similar repositories for SARS2_RBD_Ab_escape_maps
Users that are interested in SARS2_RBD_Ab_escape_maps are comparing it to the libraries listed below
Sorting:
- Observed substitution counts of SARS-CoV-2 compared to those expected under the mutation rates☆21Updated last year
- Python framework for doing ancestral sequence reconstruction☆41Updated last year
- Python Implementation of Codon Adaption Index☆37Updated 2 years ago
- Fast protein domain structure embedding+search tool☆26Updated 2 months ago
- A software-suite to perform multiple protein structure alignment and structure feature extraction.☆31Updated 2 years ago
- Virus Protein Structural Analysis Toolkit☆14Updated last year
- Maximum likelihood structural phylogenetics by including Foldseek 3Di characters. Supporting Information for Puente-Lelievre et al. 2023n…☆22Updated 6 months ago
- Protein Sequence Annotation with Language Models☆24Updated 5 months ago
- A machine learning model for the prediction of optimal growth temperature of microorganisms and enzyme catalytic optima☆60Updated 5 years ago
- Genomic language model predicts protein co-regulation and function☆84Updated 8 months ago
- ProtNote is a multimodal deep learning model that leverages free-form text to enable both supervised and zero-shot protein function predi…☆55Updated 6 months ago
- A package for making tree-based visualizations for embedding vectors☆10Updated 2 years ago
- DeepECtransformer☆28Updated 2 years ago
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆76Updated 3 months ago
- ☆12Updated 11 months ago
- ☆44Updated last year
- Transmembrane proteins predicted through Language Model embeddings☆41Updated 3 months ago
- Pipeline for searching and aligning contact maps for proteins, then running DeepFri's GCN.☆40Updated this week
- Cython bindings and Python interface to FAMSA, an algorithm for ultra-scale multiple sequence alignments.☆36Updated last month
- A Python package for mapping sequence aligned data onto protein structures☆36Updated 4 years ago
- Code for LazyAF pipeline☆21Updated last year
- Automatic oligonucleotide design for PCR-based gene synthesis☆48Updated 6 years ago
- Protein structure alignment and search algorithm☆73Updated this week
- Feature map and function annotation of Proteins☆34Updated last year
- Ancestral Sequence Reconstruction in Python☆14Updated 6 years ago
- Calculates pairwise sequence identity, similarity and normalized similarity score of proteins in a multiple sequence alignment.☆18Updated last year
- MSA(Multiple Sequence Alignment) visualization python package for sequence analysis☆165Updated 11 months ago
- Rendering protein mutation movies from predicted 3D structures☆20Updated last year
- The aim of this repository is to provide simple tools to help those working with ColabFold BATCH both for pre and post-processing steps.☆16Updated last year
- Generated color schemes for sequence alignment visualizations☆18Updated 3 years ago