☆17May 12, 2023Updated 3 years ago
Alternatives and similar repositories for SARS2_RBD_Ab_escape_maps
Users that are interested in SARS2_RBD_Ab_escape_maps are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- SARS-CoV-2 RBD antibody escape calculator☆13Nov 19, 2024Updated last year
- Official repository for the paper "Learning from pre-pandemic data to forecast viral antibody escape"☆76Oct 11, 2023Updated 3 years ago
- Cython API for the Mutation Annotated Tree (MAT) Online Phylogenetics Toolkit☆14May 28, 2025Updated last year
- Pyro models of SARS-CoV-2 variants☆79Jul 26, 2024Updated 2 years ago
- Estimating time trees from very large phylogenies☆27Sep 8, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆30Mar 6, 2025Updated last year
- Supporting repository for "Protein language models trained on multiple sequence alignments learn phylogenetic relationships" (https://www…☆17Jan 17, 2025Updated last year
- ☆17Sep 26, 2025Updated last year
- ☆20Apr 25, 2023Updated 3 years ago
- Renders SVG schema of SARS-CoV-2 clade as defined by Nextstrain☆18Nov 24, 2025Updated 11 months ago
- Observed substitution counts of SARS-CoV-2 compared to those expected under the mutation rates☆22Aug 6, 2026Updated 2 months ago
- Course materials for an introduction to SARS-CoV-2 sequencing data analysis☆14Aug 15, 2024Updated 2 years ago
- Results from a model of global SARS-CoV-2 lineage competition☆40Dec 17, 2025Updated 10 months ago
- Deep mutational scanning of the receptor-binding domain of SARS-CoV-2 Spike☆46Mar 3, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- MAximum Parsimonious Likelihood Estimation in C/C++☆12May 1, 2026Updated 6 months ago
- Quasitools is a collection of tools for analysing viral quasispecies data.☆27Nov 25, 2021Updated 4 years ago
- ☆13Jul 21, 2025Updated last year
- Systematic ProtEin AnnotatoR☆19Sep 20, 2025Updated last year
- Evolutionary velocity with protein language models☆103Dec 9, 2025Updated 10 months ago
- Reproducible workflow for SARS-CoV-2 recombinant sequence detection.☆18May 15, 2023Updated 3 years ago
- Datasets for https://github.com/nextstrain/nextclade☆47Updated this week
- A proviral intactness pipeline.☆10May 31, 2023Updated 3 years ago
- A Nextflow Pipeline for Analysis of NGS-based HIV Drug Resistance Data☆12Mar 2, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Repository containing a method for automatically identifying pathogen lineages from a phylogeny.☆18May 19, 2023Updated 3 years ago
- ☆10Oct 22, 2018Updated 8 years ago
- Mycobacterial pipeline☆11Sep 11, 2025Updated last year
- The shiny app that accompanies the ngsReports R package☆14Jun 10, 2021Updated 5 years ago
- FASTQ-to-CodFreq pipeline for HIV-1 and SARS-CoV-2☆15Aug 12, 2025Updated last year
- Official place for proposals and details around monkeypox virus lineage designations☆23Jul 7, 2026Updated 3 months ago
- Efficient phylogenetic clustering of viral sequences☆102Nov 19, 2025Updated 11 months ago
- Alignment and variant-calling pipeline for Illumina HIV sequences.☆11May 19, 2020Updated 6 years ago
- Ultrafast Sample Placement on Existing Trees☆141Jun 1, 2026Updated 5 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Pipeline to automatically analyse SARS-CoV-2 Whole genome sequencing Illumina data obtained using EasySeq SARS-CoV-2/COVID-19 Whole Geno…☆15Jul 26, 2022Updated 4 years ago
- A script to re-color a FigTree saved Nexus file☆13Jan 29, 2017Updated 9 years ago
- An RNA-Seq data exploration tool that shows read map coverage of a gene of interest along with a coloured "electronic fluorescent pictog…☆13Oct 16, 2026Updated 2 weeks ago
- ☆45Feb 13, 2026Updated 8 months ago
- SARS-Cov-2 Recombinant Finder for fasta sequences☆50Jun 22, 2022Updated 4 years ago
- A python implementation of the sinaplot using matplotlib and seaborn☆11Jun 5, 2018Updated 8 years ago
- ☆23Jun 24, 2022Updated 4 years ago