mw55309 / poRe_docs
☆17Updated 7 years ago
Alternatives and similar repositories for poRe_docs:
Users that are interested in poRe_docs are comparing it to the libraries listed below
- Improve the quality of a denovo assembly by scaffolding and gap filling☆57Updated 4 years ago
- A program for the Maximum-likelihood analysis of population genomic data.☆28Updated 4 years ago
- A pipeline for performing genome-wide association tests for bacterial genomes.☆27Updated 7 years ago
- Using kallisto for metagenomic analysis☆50Updated 8 years ago
- Rank-based Gene Ontology analysis of gene expression data☆41Updated 2 years ago
- NaS is a hybrid approach developped to take advantage of data generated using MinION device. We combine Illumina and Oxford Nanopore tech…☆15Updated 8 years ago
- Select primer sets for selective whole genome amplification (SWGA)☆32Updated 6 years ago
- ☆36Updated 3 years ago
- Generates an NCBI .tbl file of annotations on a genome.☆66Updated 7 years ago
- Horizontal Gene Transfer Detection by Mapping Sequencing Reads☆21Updated 7 years ago
- Toolkit for preparing genomes for submission to NCBI☆29Updated 3 years ago
- Long read metagenomics practical at EBAME18☆18Updated 6 years ago
- Indels are not ideal - quick test for interrupted ORFs in bacterial/microbial genomes☆53Updated last year
- ☆52Updated 3 years ago
- Tools for making blobplots or Taxon-Annotated-GC-Coverage plots (TAGC plots) to visualise the contents of genome assembly data sets as a …☆46Updated 2 years ago
- reference-based long read assemblies of bacterial genomes☆49Updated 3 years ago
- Edinburgh Genomics MinION training 2016☆33Updated 8 years ago
- Some simple scripts to ease management and local basecalling of millions of FAST5 files☆25Updated 7 years ago
- A tool to identify and annotate homoplasies on a phylogeny and sequence alignment☆20Updated 3 years ago
- de.NBI Nanopore Training Course☆20Updated 2 years ago
- Fast and pretty dotplots for whole genomes assemblies using minimap and R/ggplot2☆74Updated 8 years ago
- This is the codebase for Recycler, described in our manuscript: https://academic.oup.com/bioinformatics/article/33/4/475/2623362, by Roye…☆58Updated 4 years ago
- Please use mmgenome2 instead. Tools for extracting individual genomes from metagenomes☆27Updated 7 years ago
- Error correction for Oxford Nanopore data☆47Updated 3 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆37Updated 5 years ago
- Code for nanopore paper☆33Updated 9 years ago
- Assembly based core genome SNP alignments for bacteria☆25Updated 5 years ago
- ☆22Updated 6 years ago
- Analysis tool for Nanopore sequencing data☆33Updated 6 years ago
- Assembly by Reduced Complexity (ARC)☆41Updated 9 years ago