mims-harvard / fusenet
Network inference by fusing data from diverse distributions
☆14Updated 7 years ago
Related projects ⓘ
Alternatives and complementary repositories for fusenet
- ☆21Updated 7 years ago
- Analysis code for knowledge discovery project☆12Updated 6 years ago
- Bootstrap Elastic net regression from Time Series is a vector-autoregressive approach to causal inference from gene expression time serie…☆17Updated last year
- Tools for building and manipulating graphs in Python☆41Updated last year
- algorithms for community detection from n-partite networks☆12Updated 4 years ago
- Integrates any BAM/BED file into the ChromNet group graphical model.☆8Updated 5 years ago
- Resources for grounding protein families and complexes from text and describing their hierarchical relationships.☆18Updated 4 months ago
- Stray has been renamed fido, development continues at jsilve24/fido☆23Updated 2 years ago
- Search public databases for given genotypic information☆10Updated 6 years ago
- ☆11Updated 7 years ago
- A fast, accurate, and modularized dimensionality reduction approach based on diffusion harmonics and graph layouts. Escalates to millions…☆47Updated 3 years ago
- Implementation of Selective Clustering Annotated using Modes of Projections☆10Updated 4 years ago
- Deep neural network for predicting methylation states of single cells☆13Updated 7 years ago
- A multi-algorithm Python framework for regularized regression☆13Updated last year
- EBIC - AI-based parallel biclustering algorithm☆19Updated 6 years ago
- Out-of-Core Principal Component Analysis☆18Updated 6 years ago
- generalized principal component analysis (GLM-PCA) implemented in python☆57Updated 3 years ago
- Tips and tricks for plotting in python☆28Updated 5 years ago
- Branching Gaussian process☆28Updated last year
- Tools for munging genomic data☆21Updated 5 years ago
- Train word2vec on Pubmed data, compare 2 GO terms, compare 2 genes.☆12Updated 7 years ago
- Code and Data to accompany "Dilated Convolutions for Modeling Long-Distance Genomic Dependencies", presented at the ICML 2017 Workshop on…☆28Updated 7 years ago
- Single Cell Multiplexed Imaging Jupyter Voila Dashboard using CODEX Data☆16Updated last year
- ☆11Updated 7 years ago
- Splotch is a hierarchical generative probabilistic model for analyzing Spatial Transcriptomics (ST) data☆17Updated this week
- Here I show how to use Deep Learning for biological and biomedical Data Integration.☆11Updated 4 years ago
- Code for the paper on t-SNE with variable degree of freedom☆12Updated 5 years ago
- A thorough, straightforward, un-intimidating introduction to Gaussian processes in NumPy.☆16Updated 6 years ago
- Robust and scalable inference of cell lineages via consensus clustering. Features novel algorithms for the comparison of weighted graphs …☆14Updated 7 years ago
- Bayesian Factorization with Side Information in C++ with Python wrapper☆41Updated 2 years ago