enasequence / enaBrowserTools
A collection of scripts to assist in the retrieval of data from the ENA Browser
☆81Updated last year
Alternatives and similar repositories for enaBrowserTools
Users that are interested in enaBrowserTools are comparing it to the libraries listed below
Sorting:
- ☆39Updated this week
- Julia package powering VIVA, our tool for visualization of genomic variation data. Manual:☆86Updated last year
- What should perfect bioinformatic tools be like?☆123Updated last week
- Snakemake pipelines for nanopore sequencing data archiving and processing☆90Updated 3 years ago
- A simple toolset for BED files (warning: CLI may change before bedtk becomes stable)☆140Updated last month
- A catalogue of available long read sequencing data analysis tools☆78Updated 2 months ago
- Python programs for processing GFF3 files☆97Updated last year
- Error correction for Illumina RNA-seq reads☆66Updated last year
- Tip and tricks for BAM files☆85Updated 6 years ago
- Tips for Nextflow and cheatsheet for channel operation☆73Updated 9 months ago
- BAM Statistics, Feature Counting and Annotation☆149Updated 3 months ago
- Dfam Transposable Element Tools Docker container.☆91Updated last week
- Simple bacterial assembly and annotation pipeline☆74Updated this week
- The Subread software package is a tool kit for processing next-gen sequencing data. It includes Subread aligner, Subjunc exon-exon juncti…☆44Updated last year
- ☆35Updated 2 years ago
- ShortStack: Comprehensive annotation and quantification of small RNA genes☆92Updated 6 months ago
- A post sequencing QC tool for Oxford Nanopore sequencers☆96Updated last month
- Lima - Demultiplex Barcoded PacBio Samples☆66Updated last week
- GFF3sort: A Perl Script to sort gff3 files and produce suitable results for tabix tools☆50Updated 4 years ago
- seqfu - Sequece Fastx Utilities☆114Updated 3 months ago
- A practical guide to build de-novo transcriptome assemblies for non-model organisms (described in Montero-Mendieta et al. 2017).☆27Updated 7 years ago
- Wally: Visualization of aligned sequencing reads and contigs☆115Updated last month
- Nextflow pipeline for analysis of direct RNA Nanopore reads☆102Updated 2 weeks ago
- Quickly calculate and visualize sequence coverage in alignment files☆99Updated 5 years ago
- Grep for FASTQ files☆97Updated last month
- Match up paired end fastq files quickly and efficiently.☆149Updated 11 months ago
- Accurate and rapid RiboRNA sequences Detector based on deep learning☆110Updated last year
- reference-free transcriptome assembly for short and long reads☆103Updated last year
- a tool for inferring species tree from sequencing reads☆149Updated 2 months ago
- Merging paired-end reads and removing adapters☆44Updated 2 months ago