nanoporetech / wubLinks
Tools and software library developed by the ONT Applications group
☆64Updated 5 years ago
Alternatives and similar repositories for wub
Users that are interested in wub are comparing it to the libraries listed below
Sorting:
- Pauvre: QC and genome browser plotting Oxford Nanopore and PacBio long reads.☆54Updated last year
- My experimental tools on top of htslib. NOT OFFICIAL!!!☆59Updated 4 months ago
- ☆84Updated 11 months ago
- Specifications for PacBio® native file formats☆31Updated last year
- don't get DUP'ed or DEL'ed by your putative SVs.☆107Updated 5 years ago
- A snakemake pipeline for SV analysis from nanopore genome sequencing☆52Updated 5 years ago
- A simple toolset for BED files (warning: CLI may change before bedtk becomes stable)☆143Updated 5 months ago
- Structural Variant Index☆75Updated last year
- Same species annotation lift over pipeline.☆97Updated 2 years ago
- Long Reads Annotation pipeline☆73Updated 3 years ago
- Filtering and profiling of next-generational sequencing data using region-specific rules☆79Updated 2 years ago
- Tools to annotate genomes using long read transcriptomics data☆45Updated 5 years ago
- UCSC Nanopore☆44Updated 6 years ago
- Toolkit for calling structural variants using short or long reads☆115Updated last week
- Building SuperTranscripts: A linear representation of transcriptome data☆68Updated 4 years ago
- Pipeline for annotating genomes using long read transcriptomics data with pinfish☆28Updated 5 years ago
- HMM-HDP models for MinION signal alignments☆46Updated 8 years ago
- Lima - Demultiplex Barcoded PacBio Samples☆68Updated 9 months ago
- Tools for working with second gen assemblies, fasta sequences, etc☆95Updated 9 years ago
- A bioinformatics tutorial demonstrating a best-practice workflow to review a flowcell's sequence_summary.txt☆32Updated 5 years ago
- Structural variant caller☆55Updated 4 years ago
- Set of tools to manipulate and visualize modified base bam files☆59Updated 3 years ago
- ☆49Updated last year
- Fast and pretty dotplots for whole genomes assemblies using minimap and R/ggplot2☆77Updated 9 years ago
- Error correction of ONT transcript reads☆58Updated 2 years ago
- ☆52Updated 4 months ago
- Genotype and phase short tandem repeats using Illumina whole-genome sequencing data☆31Updated 4 years ago
- A collection of command line tools for working with sequencing data☆52Updated last week
- Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata☆58Updated 3 years ago
- Quickly calculate and visualize sequence coverage in alignment files☆100Updated 6 years ago