A small python program to simulate a real-time Nanopore sequencing run based on a previous experiment.
☆19Apr 21, 2018Updated 7 years ago
Alternatives and similar repositories for taeper
Users that are interested in taeper are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Real-time species-typing visualisation for nanopore data.☆13Apr 11, 2023Updated 3 years ago
- Subset of fast5 files contained in a fastq, BAM, or SAM file.☆12Mar 29, 2023Updated 3 years ago
- A segmentation toolkit for segment the Nanopore RNA signal.☆20Feb 18, 2025Updated last year
- ☆18Mar 5, 2017Updated 9 years ago
- Genomic neighbor typing of bacterial pathogens using MinHash☆42Jan 10, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Genome guided re-segmention and visualization for raw nanopore sequencing data.☆47Dec 20, 2018Updated 7 years ago
- ☆17Apr 1, 2018Updated 8 years ago
- Viral genome coverage evaluation for metagenomic diagnostics☆27Aug 19, 2025Updated 7 months ago
- Simulating Sequence Evolution☆11Jul 9, 2024Updated last year
- ☆15Mar 7, 2016Updated 10 years ago
- A resistome profiler for Graphing Resistance Out Of meTagenomes☆66May 11, 2020Updated 5 years ago
- reference-based long read assemblies of bacterial genomes☆52Aug 9, 2021Updated 4 years ago
- Single Cell RNA-seq UMI Filtering Facilitator☆10Oct 6, 2025Updated 6 months ago
- The first ever Lego robot to solve a random Rubik's Cube in under 1 second.☆14Feb 11, 2020Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Director (web3)☆11Jun 5, 2020Updated 5 years ago
- Repository with all my container recipes 👩🍳☆17Sep 9, 2024Updated last year
- A basecaller for Oxford Nanopore Technologies' sequencers☆121Jul 6, 2023Updated 2 years ago
- Long-read metagenomic analysis☆110Oct 10, 2023Updated 2 years ago
- Analytical R Tools for Mass Spectrometry☆14Oct 30, 2025Updated 5 months ago
- Evolutionary Bioinformatics Toolkit (EBT)☆12Jul 14, 2020Updated 5 years ago
- A fully featured MinKNOW simulator for testing read until experiments.☆25Apr 28, 2025Updated 11 months ago
- A long read simulator based on badread idea☆23Oct 7, 2022Updated 3 years ago
- Supplementary Code for "Mapping DNA methylation across development, genotype, and schizophrenia in the human frontal cortex"☆13Oct 27, 2015Updated 10 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Finding prophage regions in bacterial genomes using brute force☆22Jan 20, 2023Updated 3 years ago
- Folding@home Client Console☆14Feb 17, 2020Updated 6 years ago
- protocols for bioinformatics data analysis☆10Sep 22, 2020Updated 5 years ago
- Disty McMatrixface - compute a distance matrix from a core genome alignment file☆14Mar 15, 2023Updated 3 years ago
- A tool to reduce the size of Oxford Nanopore Technologies' datasets without losing information☆30Dec 13, 2023Updated 2 years ago
- Functions to extract information from Oxford Nanopore sequencing data and alignments☆11Dec 4, 2025Updated 4 months ago
- ☆16Jun 30, 2022Updated 3 years ago
- Network inference by fusing data from diverse distributions☆14Nov 25, 2016Updated 9 years ago
- Extract subsets of ONT (Nanopore) reads based on time☆23Sep 12, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A comparison of different Oxford Nanopore basecallers☆316Aug 5, 2019Updated 6 years ago
- Automated Preprocessing Pipeline for Fetal Resting-State fMRI Data☆16Mar 24, 2023Updated 3 years ago
- Real time and remote MCMC trace monitoring with BEASTIARY.☆21May 10, 2025Updated 11 months ago
- HMM-HDP models for MinION signal alignments☆46Apr 10, 2017Updated 9 years ago
- ☆20Oct 13, 2014Updated 11 years ago
- Instant foreign language flashcards (with audio!)☆34Oct 23, 2019Updated 6 years ago
- Comparison of single-cell normalization methods using multiple datasets with ground-truth labels☆19Dec 2, 2019Updated 6 years ago