A small python program to simulate a real-time Nanopore sequencing run based on a previous experiment.
☆17Apr 21, 2018Updated 8 years ago
Alternatives and similar repositories for taeper
Users that are interested in taeper are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Real-time species-typing visualisation for nanopore data.☆12Apr 11, 2023Updated 3 years ago
- Subset of fast5 files contained in a fastq, BAM, or SAM file.☆11Mar 29, 2023Updated 3 years ago
- A segmentation toolkit for segment the Nanopore RNA signal.☆20Feb 18, 2025Updated last year
- ☆18Mar 5, 2017Updated 9 years ago
- Genome guided re-segmention and visualization for raw nanopore sequencing data.☆47Dec 20, 2018Updated 7 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Genomic neighbor typing of bacterial pathogens using MinHash☆42Jan 10, 2023Updated 3 years ago
- ☆17Apr 1, 2018Updated 8 years ago
- Viral genome coverage evaluation for metagenomic diagnostics☆27Jul 9, 2026Updated 2 weeks ago
- Simulating Sequence Evolution☆10Jul 9, 2024Updated 2 years ago
- reference-based long read assemblies of bacterial genomes☆52Aug 9, 2021Updated 4 years ago
- A resistome profiler for Graphing Resistance Out Of meTagenomes☆65May 11, 2020Updated 6 years ago
- ☆15Mar 7, 2016Updated 10 years ago
- The first ever Lego robot to solve a random Rubik's Cube in under 1 second.☆13Feb 11, 2020Updated 6 years ago
- Single Cell RNA-seq UMI Filtering Facilitator☆10Oct 6, 2025Updated 9 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Director (web3)☆10Jun 5, 2020Updated 6 years ago
- Repository with all my container recipes 👩🍳☆17Sep 9, 2024Updated last year
- A basecaller for Oxford Nanopore Technologies' sequencers☆121Jul 6, 2023Updated 3 years ago
- Long-read metagenomic analysis☆112Oct 10, 2023Updated 2 years ago
- Analytical R Tools for Mass Spectrometry☆14Oct 30, 2025Updated 8 months ago
- Evolutionary Bioinformatics Toolkit (EBT)☆11Jul 14, 2020Updated 6 years ago
- Supplementary Code for "Mapping DNA methylation across development, genotype, and schizophrenia in the human frontal cortex"☆12Oct 27, 2015Updated 10 years ago
- A long read simulator based on badread idea☆23Oct 7, 2022Updated 3 years ago
- Folding@home Client Console☆13Feb 17, 2020Updated 6 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Finding prophage regions in bacterial genomes using brute force☆22Jan 20, 2023Updated 3 years ago
- protocols for bioinformatics data analysis☆10Sep 22, 2020Updated 5 years ago
- Disty McMatrixface - compute a distance matrix from a core genome alignment file☆15Mar 15, 2023Updated 3 years ago
- A tool to reduce the size of Oxford Nanopore Technologies' datasets without losing information☆30Dec 13, 2023Updated 2 years ago
- Functions to extract information from Oxford Nanopore sequencing data and alignments☆11Jun 15, 2026Updated last month
- OPUS-TASS: A Protein Backbone Torsion Angles and Secondary Structure Predictor Based on Ensemble Neural Networks☆10Jul 9, 2020Updated 6 years ago
- ☆16Jun 30, 2022Updated 4 years ago
- Extract subsets of ONT (Nanopore) reads based on time☆25Sep 12, 2024Updated last year
- Network inference by fusing data from diverse distributions☆14Nov 25, 2016Updated 9 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A comparison of different Oxford Nanopore basecallers☆316Aug 5, 2019Updated 6 years ago
- Automated Preprocessing Pipeline for Fetal Resting-State fMRI Data☆15Mar 24, 2023Updated 3 years ago
- A set of software tools to facilitate GWAS analysis☆19Aug 29, 2023Updated 2 years ago
- Real time and remote MCMC trace monitoring with BEASTIARY.☆21May 4, 2026Updated 2 months ago
- HMM-HDP models for MinION signal alignments☆47Apr 10, 2017Updated 9 years ago
- Comparison of single-cell normalization methods using multiple datasets with ground-truth labels☆19Dec 2, 2019Updated 6 years ago
- Antibiotic resistance predictions in minutes on a laptop☆50Mar 7, 2019Updated 7 years ago