ArtRand / signalAlignLinks
HMM-HDP models for MinION signal alignments
☆46Updated 8 years ago
Alternatives and similar repositories for signalAlign
Users that are interested in signalAlign are comparing it to the libraries listed below
Sorting:
- UCSC Nanopore☆44Updated 6 years ago
- ☆30Updated 4 years ago
- My experimental tools on top of htslib. NOT OFFICIAL!!!☆58Updated 3 months ago
- DNA methylation analysis downstream to Nanopolish for Oxford Nanopore DNA sequencing datasets☆34Updated 4 years ago
- ☆83Updated 9 months ago
- Error correction of ONT transcript reads☆58Updated 2 years ago
- Public Benchmark of Long-Read Structural Variant Caller on PacBio CCS HG002 Data☆50Updated 4 years ago
- MarginPolish: Graph based assembly polishing☆47Updated 5 years ago
- Methylation Phasing for Nanopore Sequencing☆49Updated 2 years ago
- Code for phasing SVs with SNPs☆52Updated 5 years ago
- Pipeline for annotating genomes using long read transcriptomics data with pinfish☆28Updated 5 years ago
- ☆49Updated last year
- Long-read splice alignment with high accuracy☆64Updated last year
- Tools and software library developed by the ONT Applications group☆64Updated 4 years ago
- Set of tools to manipulate and visualize modified base bam files☆58Updated 3 years ago
- An R package for estimating poly(A)-tail lengths in Oxford Nanopore RNA and DNA reads.☆54Updated last year
- DNA methylation analysis downstream to Nanopolish for Oxford Nanopore DNA sequencing datasets☆30Updated 2 years ago
- Exact Tandem Repeat Finder (not a TRF replacement)☆50Updated 6 years ago
- Long Reads Annotation pipeline☆72Updated 3 years ago
- Structural variant caller☆55Updated 4 years ago
- ☆78Updated 5 years ago
- Long read alignment analysis. Generate a reports on sequence alignments for mappability vs read sizes, error patterns, annotations and r…☆49Updated 7 years ago
- Scalable long read self-correction and assembly polishing with multiple sequence alignment☆53Updated last year
- ☆49Updated last year
- Specifications for PacBio® native file formats☆31Updated last year
- ☆46Updated 5 years ago
- A python program to call methylation (m6A in DNA) from nanopore signal data☆47Updated 4 years ago
- Lima - Demultiplex Barcoded PacBio Samples☆67Updated 7 months ago
- a long-read error correction tool using the multi-string Burrows Wheeler Transform☆45Updated 5 years ago
- Various scripts and recipes for working with nanopore data☆34Updated 9 years ago