mw55309 / EG_MinION_2016View external linksLinks
Edinburgh Genomics MinION training 2016
☆33Oct 26, 2016Updated 9 years ago
Alternatives and similar repositories for EG_MinION_2016
Users that are interested in EG_MinION_2016 are comparing it to the libraries listed below
Sorting:
- ONT assembly and Illumina polishing pipeline☆87Dec 8, 2020Updated 5 years ago
- ☆17Apr 1, 2018Updated 7 years ago
- Software for Nanopore Analysis☆10Mar 14, 2018Updated 7 years ago
- Analysis pipeline for functional metagenomic sequencing data obtained using nanopore sequencing☆12Nov 20, 2016Updated 9 years ago
- ☆18Mar 5, 2017Updated 8 years ago
- HMM-HDP models for MinION signal alignments☆46Apr 10, 2017Updated 8 years ago
- De novo assembly of nanopore reads using nextflow☆20Aug 5, 2020Updated 5 years ago
- ☆11Mar 5, 2025Updated 11 months ago
- Quality control for MinION sequencing data☆217Jan 26, 2023Updated 3 years ago
- Some simple scripts to ease management and local basecalling of millions of FAST5 files☆25Nov 25, 2017Updated 8 years ago
- A comparison of different Oxford Nanopore basecallers☆316Aug 5, 2019Updated 6 years ago
- Additional tools for analyzing Oxford Nanopore minION data☆17Jul 24, 2015Updated 10 years ago
- Antibiotic resistance predictions in minutes on a laptop☆50Mar 7, 2019Updated 6 years ago
- Scripts to estimate genome size and coverage from kmer distribution generated by jellyfish☆57Jan 26, 2023Updated 3 years ago
- Scripts and instructions for submitting annotated microbial genomes to Genbank☆15Feb 23, 2016Updated 9 years ago
- A small python program to simulate a real-time Nanopore sequencing run based on a previous experiment.☆19Apr 21, 2018Updated 7 years ago
- Bioinformatics scripts produced over the course of my work. Now maintained on GitLab.☆69Sep 7, 2019Updated 6 years ago
- A tool to reduce the size of Oxford Nanopore Technologies' datasets without losing information☆30Dec 13, 2023Updated 2 years ago
- Tools and software library developed by the ONT Applications group☆64Jan 22, 2021Updated 5 years ago
- Reproducibility workflow for Gigante et al., 2018: Using long-read sequencing to detect imprinted DNA methylation☆23Mar 4, 2019Updated 6 years ago
- A basecaller for Oxford Nanopore Technologies' sequencers☆121Jul 6, 2023Updated 2 years ago
- Pipeline for Evaluating Prokaryotic References☆11Sep 16, 2016Updated 9 years ago
- GpC methylation from fast5:s to reference anchored calls☆10Nov 18, 2020Updated 5 years ago
- MetaPORE – Chiu Laboratory, University of California, San Francisco☆12Nov 4, 2015Updated 10 years ago
- just annotate it, dammit!☆93Aug 22, 2023Updated 2 years ago
- a toolkit for working with Oxford nanopore data☆243Feb 6, 2023Updated 3 years ago
- Tools for making blobplots or Taxon-Annotated-GC-Coverage plots (TAGC plots) to visualise the contents of genome assembly data sets as a …☆47May 27, 2022Updated 3 years ago
- a signal-level demultiplexer for Oxford Nanopore reads☆126Jan 18, 2021Updated 5 years ago
- A simple tool for extracting reads from Oxford Nanopore fast5 files☆26Sep 4, 2017Updated 8 years ago
- ASMNGS18 - 2018 Conference Details☆12Oct 3, 2018Updated 7 years ago
- ☆12Aug 16, 2016Updated 9 years ago
- Tool (experimental) to compute layout from overlaps with spectral algorithm☆11Nov 28, 2017Updated 8 years ago
- re-assembly and analysis of the Marine Microbial Eukaryotic Transcriptome Sequencing Project☆14Sep 18, 2018Updated 7 years ago
- Generate mutated sequence files from a reference genome.☆11Dec 26, 2022Updated 3 years ago
- Nanopore read de-multiplexer☆13Mar 25, 2020Updated 5 years ago
- Genome guided re-segmention and visualization for raw nanopore sequencing data.☆47Dec 20, 2018Updated 7 years ago
- Read Assignment, Mapping, and Phylogenetic Analysis in Real Time☆82Mar 11, 2025Updated 11 months ago
- The software involved in the MetaPhase project, as described in G3 (http://dx.doi.org/10.1534/g3.114.011825)☆17Oct 12, 2018Updated 7 years ago
- Galaxy Docker Image with Tools for Genome Annotation☆12Apr 20, 2021Updated 4 years ago