mw55309 / EG_MinION_2016Links
Edinburgh Genomics MinION training 2016
☆33Updated 9 years ago
Alternatives and similar repositories for EG_MinION_2016
Users that are interested in EG_MinION_2016 are comparing it to the libraries listed below
Sorting:
- Tools and software library developed by the ONT Applications group☆64Updated 4 years ago
- Pauvre: QC and genome browser plotting Oxford Nanopore and PacBio long reads.☆54Updated last year
- Updated Kraken DB install scripts to cope with new-ish NCBI structure☆48Updated 8 years ago
- Distribution package for the Prgressive Cactus multiple genome aligner. Dependencies are linked as submodules☆88Updated 7 years ago
- Quickly calculate and visualize sequence coverage in alignment files☆100Updated 6 years ago
- ☆17Updated 7 years ago
- Fast and pretty dotplots for whole genomes assemblies using minimap and R/ggplot2☆76Updated 9 years ago
- Analysis tool for Nanopore sequencing data☆34Updated 6 years ago
- More realistic simulator for genomic DNA sequences from Illumina machines that achieves a similar k-mer spectrum as the original☆51Updated 3 years ago
- ☆49Updated last year
- Improve the quality of a denovo assembly by scaffolding and gap filling☆56Updated 4 years ago
- ONT assembly and Illumina polishing pipeline☆89Updated 4 years ago
- Experimental pipeline for correcting nanopore reads☆39Updated 8 years ago
- High-performance error correction for Illumina resequencing data☆73Updated 9 years ago
- Building SuperTranscripts: A linear representation of transcriptome data☆68Updated 4 years ago
- Software for clustering de novo assembled transcripts and counting overlapping reads☆76Updated 3 years ago
- An ultrafast optimal aligner for mapping large NGS data to large genome databases.☆57Updated last year
- A bioinformatics tutorial demonstrating a best-practice workflow to review a flowcell's sequence_summary.txt☆31Updated 4 years ago
- Using kallisto for metagenomic analysis☆49Updated 8 years ago
- A small bash script that automates sweeping Guppy parameters in an attempt to optimise basecalling rate☆30Updated 3 years ago
- Dual barcode and primer demultiplexing for MinION sequenced reads☆41Updated 2 years ago
- This is the codebase for Recycler, described in our manuscript: https://academic.oup.com/bioinformatics/article/33/4/475/2623362, by Roye…☆58Updated 4 years ago
- PHAST☆77Updated this week
- Repo for the software suite ShoRAH (Short Reads Assembly into Haplotypes)☆41Updated 2 years ago
- Error correction for Oxford Nanopore data☆47Updated 4 years ago
- Adapter trimming and virtual library creation for Illumina Nextera Mate Pair libraries.☆53Updated 7 years ago
- ☆79Updated 5 years ago
- Visualize whole genome alignments as linear maps☆73Updated 3 months ago
- UCSC Nanopore☆44Updated 6 years ago
- Select primer sets for selective whole genome amplification (SWGA)☆32Updated 6 years ago