mateidavid / nanocallLinks
An Oxford Nanopore Basecaller
☆70Updated 4 years ago
Alternatives and similar repositories for nanocall
Users that are interested in nanocall are comparing it to the libraries listed below
Sorting:
- Error correction for Oxford Nanopore data☆47Updated 4 years ago
- Analysis tool for Nanopore sequencing data☆34Updated 6 years ago
- A C++ header-only library for reading Oxford Nanopore Fast5 files☆53Updated 3 years ago
- Scripts for implementing read until and other examples.☆31Updated 5 years ago
- De novo genome assembly and multisample variant calling☆112Updated 6 years ago
- Antibiotic resistance predictions in minutes on a laptop☆50Updated 6 years ago
- High-performance error correction for Illumina resequencing data☆74Updated 9 years ago
- Experimental pipeline for correcting nanopore reads☆39Updated 8 years ago
- Tools and software library developed by the ONT Applications group☆64Updated 5 years ago
- Standalone C library for assembling Illumina short reads in small regions☆72Updated 3 years ago
- Distribution package for the Prgressive Cactus multiple genome aligner. Dependencies are linked as submodules☆88Updated 7 years ago
- Genome guided re-segmention and visualization for raw nanopore sequencing data.☆47Updated 7 years ago
- A tool to reduce the size of Oxford Nanopore Technologies' datasets without losing information☆30Updated 2 years ago
- Estimating k-mer coverage histogram of genomics data☆77Updated 2 years ago
- 10x Genomics Reads Simulator☆46Updated 2 years ago
- ☆49Updated 3 years ago
- ⛓ Long Interval Nucleotide K-mer Scaffolder☆74Updated 9 months ago
- Real time data analysis tools for the minION sequencing platform.☆30Updated 3 years ago
- PacBio hybrid error correction through iterative short read consensus☆60Updated 6 years ago
- An illumina paired-end and mate-pair short read simulator. This project attempts to model as many of the quirks that exist in Illumina da…☆68Updated 11 years ago
- ☆49Updated last year
- LoFreq Star: Sensitive variant calling from sequencing data☆110Updated 3 months ago
- k-mer counting software☆39Updated 3 years ago
- A draft genome scaffolder that uses multiple reference genomes in a graph-based approach.☆45Updated 4 years ago
- Blast2Bam uses the XML results of Blastn, the reference and the fastQ or fasta file(s) to output a SAM file.☆50Updated 4 years ago
- A bioinformatics tutorial demonstrating a best-practice workflow to review a flowcell's sequence_summary.txt☆31Updated 5 years ago
- Automatically optimise three of Velvet's assembly parameters.☆49Updated 3 years ago
- De novo assembly based variant calling pipeline for Illumina short reads☆110Updated 5 years ago
- UCSC Nanopore group's software pipeline for reference-based sequence analysis☆55Updated 10 years ago
- UCSC Nanopore☆44Updated 6 years ago