galaxyproject / awesome-galaxyLinks
Awesome resources related to Galaxy project
☆11Updated last year
Alternatives and similar repositories for awesome-galaxy
Users that are interested in awesome-galaxy are comparing it to the libraries listed below
Sorting:
- cache packages permanently☆15Updated 2 months ago
- Nextflow workshop 2018 -- Training pages -> https://nextflow-io.github.io/nf-hack18/☆19Updated 6 years ago
- Malleable All-seeing Journal Of Research Artifacts☆35Updated 2 years ago
- A tool to reduce the size of Oxford Nanopore Technologies' datasets without losing information☆30Updated last year
- ☆33Updated 8 years ago
- Output FASTQ summary statistics in JSON format☆29Updated 3 years ago
- Public Health England SNP calling pipeline.☆37Updated 7 years ago
- Get microbial sequence data easier and faster☆28Updated 6 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆36Updated 6 years ago
- Strip reads from Oxford Nanopore FAST5 files if they meet certain criteria☆14Updated 4 years ago
- ☆18Updated 8 years ago
- FLS Galaxy tools and tool-wrappers for in-house and third-party bioinformatic applications.☆14Updated last year
- A small python program to simulate a real-time Nanopore sequencing run based on a previous experiment.☆19Updated 7 years ago
- Amplicon Sequencing Analysis Pipeline☆18Updated 2 months ago
- Benchmark datasets for WGS analysis☆39Updated 6 years ago
- Galaxy tools and workflows developed at the Earlham Institute☆14Updated 2 weeks ago
- Animated GIF of flow cell performance from sequencing summary file.☆13Updated 7 years ago
- ☆17Updated 7 years ago
- Various scripts and recipes for working with nanopore data☆34Updated 9 years ago
- Some simple scripts to ease management and local basecalling of millions of FAST5 files☆25Updated 8 years ago
- Converts Prokka GFF3 files to EMBL files for uploading annotated assemblies to EBI☆29Updated 7 years ago
- Error correction for Oxford Nanopore data☆47Updated 4 years ago
- Files and methodology pertaining to the sequencing and analysis of SARS-CoV-2, causative agent of COVID-19.☆31Updated 3 weeks ago
- Antibiotic resistance predictions in minutes on a laptop☆50Updated 6 years ago
- Pipelines to do MinION sequencing of Zika virus☆15Updated 6 years ago
- Assembly and intrahost / low-frequency variant calling for viral samples☆15Updated 5 years ago
- Tools for making blobplots or Taxon-Annotated-GC-Coverage plots (TAGC plots) to visualise the contents of genome assembly data sets as a …☆47Updated 3 years ago
- Pipeline to generate NGS reads from a phylogeny☆39Updated 3 years ago
- Pipeline for structural variant image curation and analysis.☆49Updated 4 years ago
- VIRULIGN: fast codon-correct alignment and annotation of viral genomes☆35Updated 4 years ago