Alternatives and similar repositories for Genome_annotation

Users that are interested in Genome_annotation are comparing it to the libraries listed below

• aubombarely / GenoToolBox
  A box of genomics tools
  ☆21Updated 4 years ago
• alachins / sweed
  Likelihood-based Selective Sweep Detection
  ☆37Updated last year
• Farre-lab / syntenyPlotteR
  R package to draw syntenic plots in 3 different styles
  ☆41Updated last year
• dwinter / repeatR
  read and analyse RepeatMasker output
  ☆24Updated 2 years ago
• johnssproul / RepeatProfiler
  ☆25Updated 3 months ago
• DrosophilaGenomeEvolution / TrEMOLO
  Transposable Elements MOvement detection using LOng reads
  ☆21Updated last month
• bergmanlab / TELR
  TELR is a fast non-reference transposable element detector from long read sequencing data.
  ☆33Updated last year
• mcstitzer / maize_genomic_ecosystem
  ☆11Updated 2 years ago
• HuffordLab / GenomeQC
  ☆32Updated 4 years ago
• almeidasilvaf / doubletrouble
  An R package to identify and classify duplicated genes from whole-genome protein sequence data
  ☆26Updated 2 months ago
• yangjl / pseudoRef
  Make Pseudo-Reference Genome from VCF/BCF
  ☆14Updated 4 years ago
• obenno / ShinySyn
  A shiny application to visualize MCscan result
  ☆36Updated 2 years ago
• schneebergerlab / AMPRIL-genomes
  scripts for the project of seven thaliana genomes assembly
  ☆38Updated 4 years ago
• eswlab / orphan-prediction
  methods for orphan gene prediction paper optimization
  ☆25Updated 3 years ago
• oushujun / MTEC
  A repo contains historical and updated MTEC libraries.
  ☆18Updated 5 years ago
• guillemylla / Crickets_Genome_Annotation
  Gennome annotation scripts for the crickets Gryllus bimaculatus and Laupala kohalensis.
  ☆13Updated 3 years ago
• mikolmogorov / maf2synteny
  A tool for recovering synteny blocks from multiple alignment
  ☆30Updated 3 years ago
• PacificBiosciences / pbipa
  Improved Phased Assembler
  ☆28Updated 3 years ago
• reubwn / collinearity
  scripts to parse and analyse MCScanX collinearity output
  ☆31Updated 5 years ago
• weigelworld / pan-nlrome
  The GitHub repository for the A. thaliana pan-NLR'ome project.
  ☆17Updated 6 years ago
• mfumagalli / ngsPopGen
  Population genetics analyses from NGS data
  ☆25Updated 4 years ago
• sanger-tol / yahs
  Yet another Hi-C scaffolding tool
  ☆19Updated 7 months ago
• Popgen48 / scalepopgen
  ☆23Updated last year
• MartinPippel / DAmar
  Long read QC, assembly and scaffolding pipeline
  ☆13Updated 4 years ago
• jkimlab / mySyntenyPortal
  A stand-alone application for constructing websites for visualizing and browsing synteny blocks
  ☆18Updated 4 years ago
• lauguma / GWideCodeML
  A Python package for testing evolutionary hypotheses in genome-wide approaches.
  ☆31Updated 4 years ago
• zeeev / smartie-sv
  calling SVs from Blasr contig level alignments
  ☆54Updated 7 years ago
• SIWLab / Lab_Info
  info and docs for the Wright Lab
  ☆14Updated 9 years ago
• yongzhiyang2012 / WGDdetector
  ☆21Updated 5 years ago
• jdaron / CLARI-TE
  ☆11Updated 10 years ago