lvclark / polyRADLinks
Genotype Calling with Uncertainty from Sequencing Data in Polyploids 🍌🍓🥔🍠🥝
☆31Updated 5 months ago
Alternatives and similar repositories for polyRAD
Users that are interested in polyRAD are comparing it to the libraries listed below
Sorting:
- ☆30Updated 2 months ago
- RADseq Data Exploration, Manipulation and Visualization using R☆59Updated last month
- Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…☆38Updated last year
- Population genetic simulations in R 🌍☆60Updated last week
- Fast and simple simulation-based population genetic inference in R☆27Updated last month
- method for modeling continuous and discrete population genetic structure☆36Updated last year
- An R package for reproducible and automated ADMIXTOOLS analyses☆33Updated 5 months ago
- An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.☆151Updated last year
- Extra add-ons that may be useful for people using SLiM, but that are not part of the SLiM project itself☆43Updated 3 months ago
- 🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction☆71Updated last month
- initial commit☆26Updated 2 years ago
- Shiny apps for teaching Population Genetics☆65Updated 2 years ago
- Genetic maps in autopolyploids☆29Updated 2 months ago
- Tutorials for bioinformatics and data analysis related to landscape genomics☆29Updated 6 years ago
- the hierfstat package☆25Updated 8 months ago
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆42Updated 2 weeks ago
- A smorgasbord of R functions for population genomic analyses☆18Updated 2 weeks ago
- Comprehensive, detailed and interactive plots for STRUCTURE and ADMIXTURE population analysis☆21Updated 8 months ago
- ☆30Updated 2 years ago
- Population assignment analysis using R☆17Updated last month
- A program for multimodel inference on speciation and trait evolution☆33Updated 7 years ago
- Modification of BayesAss 3.0.4 to allow handling of large SNP datasets☆16Updated 3 years ago
- microhaplotype visualizer and analyzer☆19Updated 4 years ago
- A package for population structure inference from RAD-seq data☆33Updated 4 years ago
- QTL analysis in diallel populations☆12Updated last year
- Process MS results in R, in a tidy way☆17Updated 7 years ago
- Using genome-wide markers for polyploid breeding☆11Updated 7 months ago
- Population and Evolutionary Genetics Analysis System☆29Updated 5 months ago
- R package and web app for spatial visualisation of admixture on a projected map☆44Updated 4 months ago
- PHYLOgenomic analysis pipeline for HERBarium specimens☆17Updated 3 months ago