LiLabAtVT / CompareTranscriptomeLinks
repository of scripts for comparative transcriptome analysis
☆18Updated 6 years ago
Alternatives and similar repositories for CompareTranscriptome
Users that are interested in CompareTranscriptome are comparing it to the libraries listed below
Sorting:
- ☆14Updated 9 months ago
- Scripts to convert between file formats for various analyses☆16Updated 3 weeks ago
- Codes for the lettuce resequencing project in 2020☆30Updated 3 years ago
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated 2 months ago
- ☆27Updated 5 months ago
- BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions☆36Updated 2 months ago
- A Python package for testing evolutionary hypotheses in genome-wide approaches.☆31Updated 4 years ago
- Open source tools and papers for structural variant analysis.☆11Updated 6 years ago
- BamDeal: a comprehensive toolkit for bam manipulation☆14Updated 2 years ago
- A genome annotation pipeline that use short and long sequencing reads alignments from animal genomes☆29Updated last year
- I often use some of the self-written programs.☆16Updated 2 months ago
- HomBlocks: A multiple-alignment construction pipeline for organelle phylogenomics based on locally collinear block searching☆34Updated 7 years ago
- A pipeline for isoseq☆23Updated 6 years ago
- Project description and analytic scripts for cis/trans regulation of fiber development in G. hirsutum☆16Updated last year
- ☆11Updated 2 years ago
- Analysis of TE contribution to features (transcripts or simple features). Includes utils to test enrichment.☆27Updated 5 years ago
- ☆12Updated 6 years ago
- ☆15Updated 3 years ago
- ☆28Updated 2 years ago
- ☆21Updated 5 years ago
- De novo annotation of young retrotransposons☆48Updated 3 years ago
- MetMiner: A user-friendly pipeline for large-scale plant metabolomics data analysis☆16Updated 6 months ago
- Extract longest transcript or longest CDS transcript from GTF annotation file or gencode transcripts fasta file.☆21Updated 3 years ago
- ☆21Updated 6 years ago
- tutorial on pggb☆34Updated 4 months ago
- Some bioinformic domestic scripts.☆34Updated 2 years ago
- read and analyse RepeatMasker output☆24Updated 2 years ago
- Documentation for Evolview☆28Updated 3 years ago
- A comprehensive pipeline for RNAseq data analysis☆22Updated 9 months ago
- Structural variant merging tool☆49Updated 9 months ago