yongzhiyang2012 / genome_analysis
☆14Updated 5 years ago
Related projects ⓘ
Alternatives and complementary repositories for genome_analysis
- Pan-genome Construction and Population Structure Variation Calling pipeline☆33Updated 2 months ago
- scripts☆15Updated 6 years ago
- ☆21Updated 2 years ago
- scripts for the project of seven thaliana genomes assembly☆38Updated 3 years ago
- Centromics: visualing centromeres with multiple omics data☆17Updated 10 months ago
- Centromics: visualing centromeres with multiple omics data☆22Updated 2 weeks ago
- Bulked-Segregant Analysis using vcf file with or without parents☆23Updated 7 months ago
- ☆20Updated 3 months ago
- Scripts that used in our chicken T2T manuscript.☆19Updated last year
- Scripts of population genomics analysis☆34Updated 6 years ago
- Python script calculating transposable element density for all genes in a genome. Publication: https://mobilednajournal.biomedcentral.com…☆30Updated last month
- ☆24Updated 3 years ago
- Genome haplotype assembly and assessment method☆11Updated 11 months ago
- Instruction and scripts for reconstructing ancestral genome from pairwise syntenic blocks using MLGO☆13Updated 6 years ago
- The code used in the manuscript titled "Gene duplication and evolution in recurring polyploidization-diploidization cycles in plants".☆29Updated 3 years ago
- A rapid and accurate ensemble pipeline for graph-based variant genotyping with lower depth of short reads☆36Updated 4 months ago
- ☆22Updated 2 months ago
- Methods and recipes for Plant Genome Annotation - Transposable Elements☆18Updated last year
- ☆36Updated last year
- Code for Article "A pan-genome of 69 Arabidopsis thaliana accessions reveals a conserved genome structure throughout the global species r…☆17Updated 5 months ago
- Scripts for Wang et al (2020) Evidence for widespread selection in shaping the genomic landscape during speciation of Populus.☆11Updated 4 years ago
- ☆11Updated 5 years ago
- Analyses of sex chromosome evolution in songbirds☆15Updated 5 years ago
- ☆20Updated 8 months ago
- ☆28Updated 2 months ago
- ☆9Updated 8 years ago
- Genome Annotation Pipeline☆32Updated 3 months ago
- Automated pipeline for running CoalHMM☆11Updated 11 months ago
- ☆21Updated 2 years ago
- Pooled Sequencing Analysis for Sex Signal☆11Updated 3 years ago