Alternatives and similar repositories for Managing_batch_effects

Users that are interested in Managing_batch_effects are comparing it to the libraries listed below

• gtonkinhill / TCGA_analysis
  ☆26Updated 2 years ago
• markrobinsonuzh / TreeSummarizedExperiment
  An extension class of SummarizedExperiment to allow hierarchical structure on the row or column dimension
  ☆14Updated 6 months ago
• ELTEbioinformatics / mulea
  mulea - an R package for enrichment analysis using various ontologies and empirical false discovery rate
  ☆28Updated 2 weeks ago
• YuLab-SMU / MMINP
  Microbe-Metabolite INteractions-based metabolic profiles Predictor
  ☆15Updated 2 years ago
• pcastellanoescuder / POMA
  Omics Data Analysis Tools
  ☆14Updated last year
• abbvie-external / OmicNavigator
  Open-Source Software for Omic Data Analysis and Visualization
  ☆40Updated last week
• nuno-agostinho / psichomics
  Interactive R package to quantify, analyse and visualise alternative splicing
  ☆37Updated last week
• 123xiaochen / VCFshiny
  ☆29Updated last year
• jokergoo / KeywordsEnrichment
  ☆32Updated 2 years ago
• Gibbons-Lab / mbtools
  R package for microbiome analysis. Provides helper functions for common workflows ranging from preprocessing to visualization.
  ☆24Updated 2 years ago
• NBISweden / workshop-mlbiostatistics
  Geared towards life scientists wanting to be able to understand and use basic statistical and machine learning methods
  ☆16Updated 3 weeks ago
• dsurujon / ShinyOmics
  Exploration of Omics data
  ☆24Updated 5 years ago
• sunshanwen / BP4RNAseq
  An automated pipe for reproducible RNA-seq analysis with the minimal efforts from researchers. You only need to provide the taxa name and…
  ☆14Updated 3 years ago
• xiaolw95 / NetMoss
  ☆14Updated 3 years ago
• cxli233 / customized_upset_plots
  Make customized upset plots: from raw data to plots
  ☆62Updated 5 months ago
• metaOmics / metaOmics
  Shiny GUI application for genomics meta-analysis
  ☆22Updated 5 years ago
• barreiro-r / fastqc-viz
  A modest re-desing update for the classic FastQC report.
  ☆29Updated 5 months ago
• lindsayrutter / bigPint
  Bioconductor package that makes BIG data pint-sized.
  ☆21Updated last year
• guokai8 / microbial
  Do microbiome analysis with dada2 and phyloseq object
  ☆14Updated last year
• cxli233 / ggpathway
  A tutorial for pathway visualization using tidyverse, igraph, and ggraph
  ☆61Updated last year
• lpantano / DEGreport
  Create a cromphensive report of DEG list coming from any analysis of RNAseq data
  ☆27Updated 4 months ago
• himelmallick / Tweedieverse
  Differential analysis of multi-omics data based on the Tweedie distribution
  ☆28Updated 2 months ago
• Bioconductor / BiocWorkshops2019
  The official repository of the Bioconductor 2019 Conference Workshops
  ☆24Updated 2 years ago
• drisso / RUVSeq
  Clone of the Bioconductor repository for the RUVSeq package, see https://bioconductor.org/packages/devel/bioc/html/RUVSeq.html for the of…
  ☆14Updated 3 years ago
• ConesaLab / MultiPower
  Statistical power studies for multi-omics experiments.
  ☆32Updated last year
• krumsieklab / maplet
  R statistical toolbox for metabolomics
  ☆24Updated last week
• js2264 / tidyCoverage
  ☆23Updated last month
• Bioconductor / GenomicRanges
  Representation and manipulation of genomic intervals
  ☆46Updated 2 months ago
• ying14 / yingtools2
  Ying's tools for analysis, with particular focus on microbiome data
  ☆41Updated 2 weeks ago
• leekgroup / networks_correction
  Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"
  ☆16Updated 6 years ago