Just Annotate My Genome
☆19May 21, 2026Updated this week
Alternatives and similar repositories for JAMg
Users that are interested in JAMg are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- OrthoFiller: Identifying missing annotations for evolutionarily conserved genes.☆22Dec 1, 2022Updated 3 years ago
- Hapo-G is a tool that aims to improve the quality of genome assemblies by polishing the consensus with accurate reads.☆26Oct 24, 2025Updated 7 months ago
- Combine reference and assembled transcriptomes for RNA-Seq analysis☆24Feb 12, 2020Updated 6 years ago
- Scaffolding with assembly likelihood optimization☆21Dec 14, 2020Updated 5 years ago
- ☆16Apr 3, 2023Updated 3 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- GAPPadder is tool for closing gaps on draft genomes with short sequencing data☆28Jun 1, 2017Updated 8 years ago
- This repository has been archived, currently maintained version is at https://github.com/iii-companion/companion☆21Mar 22, 2021Updated 5 years ago
- de novo targeted gene assembly☆22Apr 16, 2021Updated 5 years ago
- GeneValidator: Identify problems with predicted genes☆49Mar 1, 2024Updated 2 years ago
- ☆28Apr 21, 2026Updated last month
- Scaffolding with RNA-seq read alignment☆21Jul 10, 2018Updated 7 years ago
- Wrapper for short and long read mapping, creation of quality report(s) and estimation of genome size☆12Sep 30, 2025Updated 7 months ago
- Multi-sample transcriptome assembly from RNA-Seq☆25Jun 10, 2018Updated 7 years ago
- This tool is for users to upgrade their metagenomics assemblies using long reads. This includes fixing mis-assemblies and scaffolding/gap…☆13Mar 17, 2016Updated 10 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Genomic Visualization Catalog☆13Oct 6, 2022Updated 3 years ago
- Genome Scripts used in fungal comparative genomics☆65Sep 25, 2020Updated 5 years ago
- showTree can visualize the phylogeny, protein sequences and protein domains of a gene family in one figure.☆31Mar 28, 2019Updated 7 years ago
- defusion☆14Aug 24, 2021Updated 4 years ago
- Hagfish - assess an assembly through creative use of coverage plots☆36Aug 9, 2012Updated 13 years ago
- BESST - scaffolder for genomic assemblies☆58Jul 6, 2023Updated 2 years ago
- Iterative error correction of long reads☆13Dec 9, 2022Updated 3 years ago
- Robust Open Reading Frame prediction (ANGLE re-implementation)☆16Aug 2, 2021Updated 4 years ago
- Galaxy Docker Image with Tools for Genome Annotation☆12Apr 20, 2021Updated 5 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Synteny Mapping and Analysis Program☆30May 8, 2026Updated 2 weeks ago
- A fork of exonerate: a generic tool for sequence alignment☆71Nov 30, 2023Updated 2 years ago
- Generates an NCBI .tbl file of annotations on a genome.☆68Mar 5, 2018Updated 8 years ago
- Human Postmortem ASD RNA-seq Analysis Parikshak et al 2016☆15Sep 28, 2021Updated 4 years ago
- Reference genome quality scores☆20Dec 17, 2020Updated 5 years ago
- scripts for sequence and feature conversion, annotation, analysis ...☆28Mar 17, 2025Updated last year
- D Frequency Spectrum: Signatures of introgression across the allele frequency spectrum☆19Sep 19, 2020Updated 5 years ago
- Bioinformatics / Explore oligonucleotide composition similarity between assembly contigs or scaffolds to detect contaminant DNA.☆12Feb 27, 2019Updated 7 years ago
- Software for detecting introgression using supervised machine learning☆21Nov 21, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Taxon-aware analysis of clustered protein sequences☆31Jul 1, 2024Updated last year
- Merge transcriptome assemblies☆30Oct 6, 2016Updated 9 years ago
- ☆34Mar 2, 2023Updated 3 years ago
- High throughput protein function annotation with Human Readable Description (HRDs) and Gene Ontology (GO) Terms.☆68Aug 16, 2023Updated 2 years ago
- Assemble and following pipeline used in wisent genome paper.☆17Dec 23, 2016Updated 9 years ago
- Long read QC, assembly and scaffolding pipeline☆13Jul 13, 2020Updated 5 years ago
- PanEffect is a JavaScript framework to explore variant effects across a pangenome. The tool has two views that allows a user to (1) expl…☆13Jan 30, 2024Updated 2 years ago