cancerdatasci / demeterLinks
Deconvolution of seed effects from gene effects in large scale RNAi screens
☆10Updated 7 years ago
Alternatives and similar repositories for demeter
Users that are interested in demeter are comparing it to the libraries listed below
Sorting:
- Mean Alterations Using Discrete Expression☆14Updated last year
- Repository for signature genes from Immune Cell Atlas☆18Updated 5 years ago
- Explore the cancer relevance of your gene list☆51Updated 3 months ago
- T cell Receptor and B cell Receptor assembly from single cell RNA sequencing data☆10Updated 7 years ago
- ☆17Updated last year
- Subclonal Hierarchy Inference from Somatic Mutations☆21Updated 3 months ago
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated 2 years ago
- V'DJer - B Cell Receptor Repertoire Reconstruction from short read mRNA-Seq data☆29Updated 2 years ago
- Using k-mers to call HLA alleles in RNA sequencing data☆22Updated 6 years ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- GWAS gold standards repository☆34Updated last year
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated last year
- Modular package for generation of sets of ranges representing the null hypothesis. These can take the form of bootstrapped ranges (bootRa…☆27Updated 2 months ago
- scRNA-Seq analysis vignettes☆9Updated 3 years ago
- An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.☆26Updated last year
- MultiSKAT is an R-package focused at rare-variant analysis of continuous multiple phenotype data. This project contains the R-codes/funct…☆11Updated 5 years ago
- R/Bioconductor package to interactively explore single cell clusters at multiple resolutions☆10Updated 3 years ago
- Building the constrained coding regions (CCR) model☆16Updated 6 years ago
- Analysis for svaseq paper☆19Updated 10 years ago
- Refining the impact of genetic evidence on clinical success☆25Updated 10 months ago
- Full annotation using shape-constrained trees☆25Updated last year
- processes GoT amplicon data and generates a table of metrics☆29Updated 2 years ago
- BAGEL software☆27Updated last year
- deepStats: a stastitical toolbox for deeptools and genomic signals☆34Updated 3 years ago
- Quick access to gene synonyms☆28Updated this week
- Code for EpiMap data browser☆14Updated last year
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated 10 months ago
- zero-inflated negative binomial gene expression in R☆20Updated 7 years ago
- Differential ATAC-seq toolkit☆27Updated last year
- The vignette provided has a basic sketch of the steps we interactively will go through to build a package with devtools, explains version…☆11Updated 4 years ago