Alternatives and similar repositories for demeter:

Users that are interested in demeter are comparing it to the libraries listed below

• de-Boer-Lab / MAUDE
  Mean Alterations Using Discrete Expression
  ☆14Updated 11 months ago
• opentargets / genetics-gold-standards
  GWAS gold standards repository
  ☆32Updated last year
• mozack / vdjer
  V'DJer - B Cell Receptor Repertoire Reconstruction from short read mRNA-Seq data
  ☆29Updated 2 years ago
• sigven / oncoEnrichR
  Explore the cancer relevance of your gene list
  ☆50Updated last week
• dcalderon / rolypoly
  Method for identifying trait-relevant gene annotations from GWAS summary statistics.
  ☆17Updated 2 years ago
• caleblareau / immune_cell_signature_genes
  Repository for signature genes from Immune Cell Atlas
  ☆18Updated 5 years ago
• zhanxw / seqminer
  Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R
  ☆30Updated 5 months ago
• cboix / epimap_vis
  Code for EpiMap data browser
  ☆14Updated 9 months ago
• oganm / geneSynonym
  Quick access to gene synonyms
  ☆26Updated this week
• leekgroup / networks_correction
  Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"
  ☆16Updated 5 years ago
• stephaniehicks / methylCC
  R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms
  ☆19Updated 2 years ago
• Bioconductor / BiocWorkshops2019
  The official repository of the Bioconductor 2019 Conference Workshops
  ☆25Updated last year
• Teichlab / GPfates
  ☆19Updated 7 years ago
• ExpressionAnalysis / HLAProfiler
  Using k-mers to call HLA alleles in RNA sequencing data
  ☆22Updated 6 years ago
• immcore / iS-CellR
  iS-CellR: interactive graphical tool for analysis of single-cell RNAseq data
  ☆23Updated 5 years ago
• edsgard / scphaser
  R package for haplotype phasing using single-cell RNA-seq data
  ☆13Updated 7 years ago
• ELELAB / MoonlightR
  ☆17Updated 9 months ago
• mahmoudibrahim / JAMM
  JAMM Peak Finder for Sequencing Datasets
  ☆28Updated 5 years ago
• Nealelab / UKBB_ldsc
  Sample code for ldsc analyses in UKBB
  ☆30Updated last year
• nullranges / nullranges
  Modular package for generation of sets of ranges representing the null hypothesis. These can take the form of bootstrapped ranges (bootRa…
  ☆27Updated last year
• cancerdatasci / ceres
  Computational correction of copy-number effect in CRISPR-Cas9 essentiality screens
  ☆27Updated 5 years ago
• diptavo / MultiSKAT
  MultiSKAT is an R-package focused at rare-variant analysis of continuous multiple phenotype data. This project contains the R-codes/funct…
  ☆11Updated 5 years ago
• Dowell-Lab / DAStk
  Differential ATAC-seq toolkit
  ☆27Updated last year
• kmayerb / tcrdist2
  Quantifiable predictive features define epitope-specific T cell receptor repertoires
  ☆13Updated 2 years ago
• OSU-BMBL / IRIS
  A Shiny web server for interactive visualization and analysis of RNA-seq data
  ☆22Updated 3 years ago
• pachterlab / BBB
  Bioinformatics for Benched Biologists
  ☆22Updated 4 years ago
• jtleek / svaseq
  Analysis for svaseq paper
  ☆19Updated 10 years ago
• RGLab / FAUST
  Full annotation using shape-constrained trees
  ☆25Updated last year
• MyersGroup / testisAtlas
  Code used for mouse single cell RNAseq testis atlas
  ☆12Updated 4 years ago