ChenPy00 / PPB-AffinityLinks
Baseline model for PPB-Affinity benchmark data
☆25Updated last month
Alternatives and similar repositories for PPB-Affinity
Users that are interested in PPB-Affinity are comparing it to the libraries listed below
Sorting:
- Extension of ThermoMPNN for double mutant predictions☆33Updated 3 months ago
- workflow used to prepare PPB-Affinity database☆22Updated 10 months ago
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆33Updated 7 months ago
- Metrics for our protein design competitions.☆31Updated 7 months ago
- ☆25Updated last year
- ☆43Updated 9 months ago
- ☆38Updated 9 months ago
- ☆60Updated last year
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆31Updated last year
- ☆27Updated 4 months ago
- Graphormer Based Protein Sequence Design☆24Updated last year
- Code for designing binders to flexible peptides with AlphaFold2 Hallucination☆23Updated last year
- ☆15Updated last month
- Modelling protein conformational landscape with Alphafold☆51Updated 2 weeks ago
- ☆50Updated 3 months ago
- Generative diverse protein backbones by protein language model☆32Updated 6 months ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆49Updated last month
- ☆19Updated 7 months ago
- code for SeqDance/ESMDance, biophysics-informed protein language models☆37Updated 2 months ago
- ☆67Updated 3 months ago
- Evaluating Protein Binding Interfaces with Transformer Networks☆45Updated last year
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.☆26Updated 3 weeks ago
- ☆27Updated 2 years ago
- ☆27Updated 6 months ago
- Structure-Informed Protein Language Model☆34Updated last year
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆39Updated last year
- ☆23Updated 8 months ago
- Kuhlman Lab Installation of AlphaFold3☆26Updated last month
- Efficient manipulation of protein structures in Python☆54Updated 7 months ago
- protein structure generation with sparse all-atom denoising models☆32Updated 3 weeks ago