ChenPy00 / PPB-AffinityLinks
Baseline model for PPB-Affinity benchmark data
☆31Updated 5 months ago
Alternatives and similar repositories for PPB-Affinity
Users that are interested in PPB-Affinity are comparing it to the libraries listed below
Sorting:
- workflow used to prepare PPB-Affinity database☆28Updated last year
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆33Updated last year
- ☆62Updated last year
- Modelling protein conformational landscape with Alphafold☆54Updated 2 months ago
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆32Updated 2 years ago
- ☆44Updated last year
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆57Updated 5 months ago
- code for SeqDance/ESMDance, biophysics-informed protein language models☆41Updated 7 months ago
- ☆42Updated 3 months ago
- Extension of ThermoMPNN for double mutant predictions☆46Updated last month
- ☆15Updated last year
- Graphormer Based Protein Sequence Design☆25Updated last year
- ☆36Updated 2 years ago
- scripts to find PBD structures for cancer driver proteins☆31Updated this week
- ☆39Updated last year
- A benchmark for 3D biomolecular structure prediction models☆67Updated 6 months ago
- ☆29Updated last month
- Updated Protpardelle models with more robust motif scaffolding and multichain support☆47Updated last week
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆77Updated 3 months ago
- Code for humanization of antibody and nanobody☆63Updated 2 months ago
- Public version for Distance-AF☆28Updated 3 months ago
- All-Atom (Including Hydrogen!) Ligand-Conditioned Protein Sequence Design & Sidechain Packing Model☆24Updated last month
- Evaluating Protein Binding Interfaces with Transformer Networks☆46Updated 2 years ago
- ☆34Updated last year
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.☆37Updated last week
- Physics-Guided All-Atom Diffusion Model for Accurate Protein-Ligand Complex Prediction☆84Updated last month
- Making Protein folding accessible to all!☆24Updated last year
- ☆29Updated 9 months ago
- ☆25Updated 5 months ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆46Updated last week