Alternatives and similar repositories for philharmonic

Users that are interested in philharmonic are comparing it to the libraries listed below

• jnoms / vpSAT
  Virus Protein Structural Analysis Toolkit
  ☆14Updated last year
• graph-part / graph-part
  GraphPart, a data partitioning method for ML on biological sequences
  ☆31Updated 2 years ago
• TurtleTools / caretta
  A software-suite to perform multiple protein structure alignment and structure feature extraction.
  ☆31Updated 2 years ago
• psipred / merizo_search
  Fast protein domain structure embedding+search tool
  ☆26Updated last month
• teevee112 / DeepLoc-2.0
  Multi-label subcellular localization and sorting signal prediction based on protein foundation models
  ☆20Updated last week
• kaistsystemsbiology / DeepProZyme
  DeepECtransformer
  ☆28Updated 2 years ago
• lehner-lab / DMS2structure
  Scripts for "Determining protein structures using deep mutagenesis", Schmiedel & Lehner, Nature Genetics, 2019
  ☆17Updated 6 years ago
• esbgkannan / kibby
  A fast, alignment-free method for estimating sequence conservation using protein sequence embedding
  ☆17Updated 2 years ago
• esbgkannan / chumby
  A package for making tree-based visualizations for embedding vectors
  ☆10Updated 2 years ago
• multimeric / Unipressed
  Comprehensive Python client for the Uniprot REST API
  ☆52Updated 3 weeks ago
• GfellerLab / MixMHCpred
  HLA-I ligand predictor
  ☆43Updated last month
• allydunham / sequence_unet
  Fully convolutional deep learning variant effect predictor architecture
  ☆23Updated last year
• ThomasCMcLean / LazyAF
  Code for LazyAF pipeline
  ☆21Updated last year
• harmslab / topiary
  Python framework for doing ancestral sequence reconstruction
  ☆41Updated last year
• PombertLab / 3DFI
  The 3DFI pipeline predicts the 3D structure of proteins and searches for structural homology in the 3D space.
  ☆20Updated last year
• BioComputingUP / MobiDB-lite
  Long disorder consensus predictor
  ☆17Updated last month
• infernet-h2020 / DCAlign
  ☆11Updated last year
• idrblab / AnnoPRO
  Feature map and function annotation of Proteins
  ☆33Updated last year
• idptools / sparrow
  Next generation sequence parameter library for proteins
  ☆35Updated last month
• cbcrg / msa-af2-nf
  Nextflow pipeline for the computation of structure-based MSAs with AlphaFold2 models
  ☆12Updated 2 years ago
• Rostlab / ConSurf
  Evolutionary conservation estimation of residues or nucleotides
  ☆51Updated 3 years ago
• songlab-cal / CPT
  Cross-protein transfer learning for variant effect prediction
  ☆20Updated 2 years ago
• walterlab-HMS / SPOC
  Code repository for the SPOC tool for scoring binary AF-M predicitons.
  ☆14Updated 6 months ago
• andyposbe / ColabFold-Pipeline-Toolkit
  The aim of this repository is to provide simple tools to help those working with ColabFold BATCH both for pre and post-processing steps.
  ☆16Updated last year
• KULL-Centre / _2022_functional-sites-cagiada
  ☆23Updated 2 years ago
• FunctionLab / tapioca
  a framework for predicting global protein-protein interaction networks from dynamic mass spec data
  ☆24Updated last year
• Sanofi-Public / RiboNN
  RiboNN: predicting translation efficiencies from mRNA sequences
  ☆40Updated 3 weeks ago
• gzBiomedical / EpiScan
  Antibody-Specific Epitope Mapping
  ☆14Updated last month
• GfellerLab / MixMHC2pred
  HLA-II ligand predictor.
  ☆45Updated 2 years ago
• clairemcwhite / vcmsa
  ☆30Updated 2 years ago