Decoding the functional networks of non-model organisms
☆12May 10, 2026Updated 3 weeks ago
Alternatives and similar repositories for philharmonic
Users that are interested in philharmonic are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- From cryo-EM density map to atomic structure☆29May 13, 2026Updated 3 weeks ago
- Virus Protein Structural Analysis Toolkit☆13Sep 9, 2024Updated last year
- Homomer symmetry prediction from protein sequence☆45Mar 13, 2025Updated last year
- Deploying synthetic coevolution and machine learning to engineer protein-protein interactions☆17Jul 30, 2023Updated 2 years ago
- Official implementation of "Learning the language of protein structures"☆41Mar 18, 2026Updated 2 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Adapting protein language models and contrastive learning for highly-accurate drug-target interaction prediction.☆150May 21, 2025Updated last year
- ☆18Mar 31, 2026Updated 2 months ago
- ☆12Nov 9, 2020Updated 5 years ago
- Implementation of methods to sample from Boltzmann distributions☆22Jan 24, 2023Updated 3 years ago
- A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions☆115Feb 19, 2026Updated 3 months ago
- Inferring cell-cell interactions from pseudotime ordering of scRNA-Seq data☆26Jan 11, 2023Updated 3 years ago
- Contrastive learning of protein representations with graph neural networks for structural and functional annotations☆11Apr 23, 2023Updated 3 years ago
- Tools to build coarse grained models and perform simulations with OpenMM☆24Dec 16, 2022Updated 3 years ago
- A context aware tool for proteasomal cleavage predictions☆16May 30, 2025Updated last year
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- This is a read-only mirror of the CRAN R package repository. GOplot — Visualization of Functional Analysis Data. Homepage: https://gith…☆15Mar 30, 2016Updated 10 years ago
- Merge X-ray diffraction data with Wilson's priors, variational inference, and metadata☆23May 18, 2026Updated 3 weeks ago
- ☆15Apr 3, 2025Updated last year
- ☆11Nov 11, 2023Updated 2 years ago
- Multiresolution Tensor Learning☆10Aug 18, 2020Updated 5 years ago
- ☆22Dec 20, 2024Updated last year
- ☆40Jun 17, 2025Updated 11 months ago
- Pretrained METL models with minimal dependencies☆16Sep 18, 2025Updated 8 months ago
- The code for running the analysis component of CSI-Microbe☆11Jan 3, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Graphormer Based Protein Sequence Design☆26Feb 2, 2024Updated 2 years ago
- Gupta et al., TaxiBGC: a Taxonomy-guided Approach for Profiling Experimentally Characterized Microbial Biosynthetic Gene Clusters and Sec…☆15May 24, 2023Updated 3 years ago
- An undergraduate class on introduction to computational biology by Professor Shao Li.☆14Mar 28, 2016Updated 10 years ago
- ML-optimized library design with improved fitness and diversity for protein engineering☆37Nov 5, 2025Updated 7 months ago
- An R package to implement Differential Gene Set Enrichment Analysis (DGSEA): A statistical approach to quantify the relative enrichment o…☆15Apr 12, 2023Updated 3 years ago
- ☆18Mar 19, 2026Updated 2 months ago
- ☆31Dec 12, 2024Updated last year
- Data processing and analysis workflow for GAGE-seq, a coassay of single-cell HiC and single-cell RNA-seq☆15Oct 6, 2025Updated 8 months ago
- Precise Generation of Conformational Ensembles for Intrinsically Disordered Proteins with IDPFold☆27Sep 13, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Fit LOg-RAtio Lasso regression for compositional covariates☆16Updated this week
- We help each other to study single-cell data☆16Jan 23, 2025Updated last year
- ☆17Feb 3, 2023Updated 3 years ago
- LoRA for protein language models☆48Jan 24, 2024Updated 2 years ago
- bakerlab pymol scripts☆26Feb 6, 2020Updated 6 years ago
- GitHub repository for "Leveraging Implicit Knowledge in Neural Networks for Functional Dissection and Engineering of Proteins"☆18Mar 31, 2019Updated 7 years ago
- Basic Local Alignment of Network Topology - fast, unbiased statistical graphlet sampling for any graphlet use☆27Updated this week