Alternatives and similar repositories for metl-pretrained:

Users that are interested in metl-pretrained are comparing it to the libraries listed below

• KoubaPetr / Flexpert
  Code for the paper "Learning to engineer protein flexibility".
  ☆16Updated 3 weeks ago
• sirius777coder / GPDL
  Generative diverse protein backbones by protein language model
  ☆31Updated 4 months ago
• HySonLab / LatentDE
  LatentDE: Latent-based Directed Evolution for Protein Sequence Design
  ☆33Updated 3 weeks ago
• meilerlab / probabilities_design
  ☆13Updated 3 weeks ago
• karma211225 / KarmaLoop
  Highly accurate and efficient deep learning paradigm for full-atom protein loop modeling with KarmaLoop
  ☆11Updated 10 months ago
• amelvim / antibody-diffusion-properties
  Guiding diffusion models for antibody sequence and structure co-design with developability properties.
  ☆32Updated 5 months ago
• gitter-lab / metl
  Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models
  ☆34Updated 2 weeks ago
• ELELAB / PDBminer
  scripts to find PBD structures for cancer driver proteins
  ☆31Updated 2 months ago
• HongzhouTang / BayeStab
  this is the BateStab program
  ☆4Updated 2 years ago
• Merck / AbLEF
  Antibody Langauge Ensemble Fusion - fuses antibody structural ensemble and language representation for property prediction
  ☆11Updated last year
• Graylab / MaskedProteinEnT
  ☆11Updated 4 months ago
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆34Updated 7 months ago
• Kuhlman-Lab / PIPPack
  Implementation of Protein Invariant Point Packer (PIPPack)
  ☆32Updated 10 months ago
• PDBeurope / protein-cluster-conformers
  Clusters protein chains based on CA distance difference
  ☆14Updated 2 months ago
• matteoferla / pyrosetta-help
  Some scripts that I keep using over and over.
  ☆18Updated 3 months ago
• issararab / PEvoLM
  Protein Sequence Evolutionary Information Language Model
  ☆12Updated last year
• ShenLab / SeqDance
  code for SeqDance/ESMDance, biophysics-informed protein language models
  ☆29Updated 3 weeks ago
• petergroth / kermut
  This is the official code repository for the paper NeurIPS 2024 spotlight paper "Kermut: Composite kernel regression for protein variant …
  ☆19Updated 4 months ago
• bwicky / oligomer_hallucination
  ☆35Updated last year
• alexiscourbet / Computational-design-of-protein-nanomachines
  Code and software used to design de novo protein nanomachines. Supplementary material for "Computational design of nanoscale rotational m…
  ☆10Updated 3 years ago
• amyguo1997 / dynamic_protein_design
  Code for deep learning guided design of dynamic proteins
  ☆17Updated 9 months ago
• urban233 / PySSA
  Python rich client for visual protein Sequence to Structure Analysis
  ☆13Updated 3 weeks ago
• HannesStark / CodonMPNN
  ☆27Updated 4 months ago
• microsoft / bioemu-benchmarks
  Benchmarking code accompanying the release of `bioemu`
  ☆21Updated this week
• THGLab / int2cart
  Building more accurate protein structures from backbone torsion angles
  ☆14Updated last month
• barricklab-at-jhu / SVD-of-MSAs
  This repository contains a set of scripts for performing singular value decomposition on protein multiple sequence alignments, and analyz…
  ☆11Updated 8 months ago
• alepandini / DyNoPy
  DyNoPy
  ☆11Updated 7 months ago
• masoudk / AsiteDesign
  ☆13Updated last year
• johnyang101 / pmpnndiff
  Repository for Fast Non-autoregressive Inverse Folding with Discrete Diffusion
  ☆17Updated last year
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆32Updated last month