Alternatives and similar repositories for metl-pretrained

Users that are interested in metl-pretrained are comparing it to the libraries listed below

• Gonglab-THU / GDFold2
  ☆16Updated 8 months ago
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆38Updated 11 months ago
• amelvim / antibody-diffusion-properties
  Guiding diffusion models for antibody sequence and structure co-design with developability properties.
  ☆33Updated 9 months ago
• HannesStark / CodonMPNN
  ☆28Updated 8 months ago
• sirius777coder / GPDL
  Generative diverse protein backbones by protein language model
  ☆33Updated 8 months ago
• KoubaPetr / Flexpert
  Code for the paper "Learning to engineer protein flexibility".
  ☆19Updated last month
• masoudk / AsiteDesign
  ☆13Updated last year
• issararab / PEvoLM
  Protein Sequence Evolutionary Information Language Model
  ☆13Updated last year
• meilerlab / probabilities_design
  ☆14Updated 5 months ago
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆51Updated 3 months ago
• johnnytam100 / AlphaCutter
  This repository contains the AlphaCutter.py for the removal of non-globular regions from predicted protein structures.
  ☆15Updated 2 years ago
• SimonKitSangChu / EsmTherm
  ☆13Updated last year
• ProteinDesignLab / protpardelle-1c
  Updated Protpardelle models with more robust motif scaffolding and multichain support
  ☆28Updated this week
• alepandini / DyNoPy
  DyNoPy
  ☆11Updated 11 months ago
• programmablebio / saltnpeppr
  An Interface-Predicting Language Model for Designing Peptide-Guided Protein Degraders
  ☆16Updated 11 months ago
• ohuelab / Solubility_AfDesign
  Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol
  ☆32Updated 2 years ago
• matteoferla / pyrosetta-help
  Some scripts that I keep using over and over.
  ☆19Updated last month
• gitter-lab / metl-sim
  High-throughput framework for running molecular simulations for METL
  ☆18Updated 3 months ago
• amyguo1997 / dynamic_protein_design
  Code for deep learning guided design of dynamic proteins
  ☆30Updated last year
• ShenLab / SeqDance
  code for SeqDance/ESMDance, biophysics-informed protein language models
  ☆40Updated 4 months ago
• HySonLab / LatentDE
  LatentDE: Latent-based Directed Evolution for Protein Sequence Design
  ☆36Updated 4 months ago
• ComputArtCMCG / ProBID-NET
  ☆14Updated 2 months ago
• Profluent-Internships / ProCALM
  A conditionally adapted protein language model for the generation of enzymes
  ☆22Updated 9 months ago
• Kuhlman-Lab / PIPPack
  Implementation of Protein Invariant Point Packer (PIPPack)
  ☆35Updated last year
• anirudhvenk / antibody-dpo
  ☆23Updated 3 months ago
• ProteinDesignLab / protein_shapes
  Metrics to evaluate distributional coverage of generative models of protein structures.
  ☆15Updated 2 weeks ago
• skalyaanamoorthy / PSLMs
  ☆19Updated 9 months ago
• gitter-lab / metl
  Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models
  ☆38Updated 2 months ago
• violet-sto / Bridge-IF
  Official implementation of NeurIPS'24 paper "Bridge-IF: Learning Inverse Protein Folding with Markov Bridges"
  ☆16Updated 5 months ago
• Lailabcode / DeepViscosity
  DeepViscosity is a deep learning ANN model developed to predict high concentrated monoclonal antibody viscosity classes (Low <= 20cps, Hi…
  ☆15Updated 3 weeks ago