Alternatives and similar repositories for GDFold2

Users that are interested in GDFold2 are comparing it to the libraries listed below

• ohuelab / Solubility_AfDesign
  Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol
  ☆32Updated 2 years ago
• meilerlab / probabilities_design
  ☆15Updated 5 months ago
• masoudk / AsiteDesign
  ☆13Updated last year
• anirudhvenk / antibody-dpo
  ☆24Updated 3 months ago
• PKUliujl / GeoSeqBuilder
  ☆28Updated 7 months ago
• ComputArtCMCG / ProBID-NET
  ☆14Updated 3 months ago
• lauramarie99 / ProtDesign2
  ProteinDesign with RFdiffusion and ProteinMPNN/LigandMPNN
  ☆21Updated 6 months ago
• alepandini / DyNoPy
  DyNoPy
  ☆11Updated last year
• KhondamirRustamov / FoldCraft
  ☆37Updated last month
• ProteinDesignLab / protpardelle-1c
  Updated Protpardelle models with more robust motif scaffolding and multichain support
  ☆32Updated this week
• johnnytam100 / AlphaCutter
  This repository contains the AlphaCutter.py for the removal of non-globular regions from predicted protein structures.
  ☆15Updated 2 years ago
• danny305 / StabilityOracle
  ☆28Updated last year
• ZhuofanShen / Rosetta-Enzyme-Design-Pipeline
  ☆10Updated 3 weeks ago
• gitter-lab / metl-pretrained
  Pretrained METL models with minimal dependencies
  ☆15Updated 4 months ago
• amyguo1997 / dynamic_protein_design
  Code for deep learning guided design of dynamic proteins
  ☆29Updated last year
• HannesStark / CodonMPNN
  ☆28Updated 9 months ago
• LongxingCao / pymol_scripts
  bakerlab pymol scripts
  ☆24Updated 5 years ago
• matteoferla / pyrosetta-help
  Some scripts that I keep using over and over.
  ☆20Updated 2 months ago
• mabr3112 / riff_diff_protflow
  ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.
  ☆34Updated this week
• amelvim / antibody-diffusion-properties
  Guiding diffusion models for antibody sequence and structure co-design with developability properties.
  ☆33Updated 10 months ago
• luwei0917 / AlphaFold3_PPI
  ☆15Updated last year
• luo-group / MODIFY
  ML-optimized library design with improved fitness and diversity for protein engineering
  ☆35Updated last year
• Huatsing-Lau / PPB-Affinity-DataPrepWorkflow
  workflow used to prepare PPB-Affinity database
  ☆27Updated last year
• ohuelab / ColabDesign-cyclic-binder
  ☆34Updated 2 years ago
• davidekim / parametric_barrels
  ☆13Updated 7 months ago
• ohuelab / ColabFold-cycpep-dock
  Making Protein folding accessible to all!
  ☆23Updated last year
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆52Updated 3 months ago
• violet-sto / Bridge-IF
  Official implementation of NeurIPS'24 paper "Bridge-IF: Learning Inverse Protein Folding with Markov Bridges"
  ☆16Updated 6 months ago
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆38Updated last year
• matsagad / mres-project
  Conditioning diffusion models for scaffolding protein motifs. A repository for my master's dissertation.
  ☆10Updated 9 months ago